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Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks
Bioluminescent tomography (BLT) has increasingly important applications in preclinical studies. However, the simplified photon propagation model and the inherent ill-posedness of the inverse problem limit the quality of BLT reconstruction. In order to improve the reconstruction accuracy of positioni...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558399/ https://www.ncbi.nlm.nih.gov/pubmed/34733793 http://dx.doi.org/10.3389/fonc.2021.760689 |
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author | Yu, Jingjing Dai, Chenyang He, Xuelei Guo, Hongbo Sun, Siyu Liu, Ying |
author_facet | Yu, Jingjing Dai, Chenyang He, Xuelei Guo, Hongbo Sun, Siyu Liu, Ying |
author_sort | Yu, Jingjing |
collection | PubMed |
description | Bioluminescent tomography (BLT) has increasingly important applications in preclinical studies. However, the simplified photon propagation model and the inherent ill-posedness of the inverse problem limit the quality of BLT reconstruction. In order to improve the reconstruction accuracy of positioning and reconstruction efficiency, this paper presents a deep-learning optical reconstruction method based on one-dimensional convolutional neural networks (1DCNN). The nonlinear mapping relationship between the surface photon flux density and the distribution of the internal bioluminescence sources is directly established, which fundamentally avoids solving the ill-posed inverse problem iteratively. Compared with the previous reconstruction method based on multilayer perceptron, the training parameters in the 1DCNN are greatly reduced and the learning efficiency of the model is improved. Simulations verify the superiority and stability of the 1DCNN method, and the in vivo experimental results further show the potential of the proposed method in practical applications. |
format | Online Article Text |
id | pubmed-8558399 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85583992021-11-02 Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks Yu, Jingjing Dai, Chenyang He, Xuelei Guo, Hongbo Sun, Siyu Liu, Ying Front Oncol Oncology Bioluminescent tomography (BLT) has increasingly important applications in preclinical studies. However, the simplified photon propagation model and the inherent ill-posedness of the inverse problem limit the quality of BLT reconstruction. In order to improve the reconstruction accuracy of positioning and reconstruction efficiency, this paper presents a deep-learning optical reconstruction method based on one-dimensional convolutional neural networks (1DCNN). The nonlinear mapping relationship between the surface photon flux density and the distribution of the internal bioluminescence sources is directly established, which fundamentally avoids solving the ill-posed inverse problem iteratively. Compared with the previous reconstruction method based on multilayer perceptron, the training parameters in the 1DCNN are greatly reduced and the learning efficiency of the model is improved. Simulations verify the superiority and stability of the 1DCNN method, and the in vivo experimental results further show the potential of the proposed method in practical applications. Frontiers Media S.A. 2021-10-18 /pmc/articles/PMC8558399/ /pubmed/34733793 http://dx.doi.org/10.3389/fonc.2021.760689 Text en Copyright © 2021 Yu, Dai, He, Guo, Sun and Liu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Yu, Jingjing Dai, Chenyang He, Xuelei Guo, Hongbo Sun, Siyu Liu, Ying Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks |
title | Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks |
title_full | Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks |
title_fullStr | Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks |
title_full_unstemmed | Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks |
title_short | Bioluminescence Tomography Based on One-Dimensional Convolutional Neural Networks |
title_sort | bioluminescence tomography based on one-dimensional convolutional neural networks |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558399/ https://www.ncbi.nlm.nih.gov/pubmed/34733793 http://dx.doi.org/10.3389/fonc.2021.760689 |
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