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Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease

PURPOSE: Genetic testing results are currently obtained approximately 1 year after referral to a medical genetics team for autosomal dominant polycystic kidney disease (ADPKD). We evaluated a mainstream genetic testing (MGT) pathway whereby the nephrology team provided pre-test counseling and select...

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Autores principales: Elliott, Mark D., James, Leslie C., Simms, Emily L., Sharma, Priyana, Girard, Louis P., Cheema, Kim, Elliott, Meghan J., Lauzon, Julie L., Chun, Justin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558595/
https://www.ncbi.nlm.nih.gov/pubmed/34733539
http://dx.doi.org/10.1177/20543581211055001
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author Elliott, Mark D.
James, Leslie C.
Simms, Emily L.
Sharma, Priyana
Girard, Louis P.
Cheema, Kim
Elliott, Meghan J.
Lauzon, Julie L.
Chun, Justin
author_facet Elliott, Mark D.
James, Leslie C.
Simms, Emily L.
Sharma, Priyana
Girard, Louis P.
Cheema, Kim
Elliott, Meghan J.
Lauzon, Julie L.
Chun, Justin
author_sort Elliott, Mark D.
collection PubMed
description PURPOSE: Genetic testing results are currently obtained approximately 1 year after referral to a medical genetics team for autosomal dominant polycystic kidney disease (ADPKD). We evaluated a mainstream genetic testing (MGT) pathway whereby the nephrology team provided pre-test counseling and selection of patients with suspected ADPKD for genetic testing prior to direct patient interaction by a medical geneticist. SOURCES OF INFORMATION: A multidisciplinary team of nephrologists, genetic counselors, and medical geneticists developed an MGT pathway for ADPKD using current testing criteria for adult patient with suspected ADPKD and literature from MGT in oncology. METHODS: An MGT pathway was assessed using a prospective cohort and compared to a retrospective cohort of 56 patients with ADPKD who received genetic testing using the standard, traditional pathway prior to implementing the MGT for ADPKD. The mainstream pathway was evaluated using time to diagnosis, diagnostic yield, and a patient survey to assess patient perceptions of the MGT pathway. KEY FINDINGS: We assessed 26 patients with ADPKD using the MGT and 18 underwent genetic testing with return of results. Of them, 52 patients had data available for analysis in the traditional control cohort. The time for return of results using our MGT pathway was significantly shorter with a median time to results of 6 months compared to 12 months for the traditional pathway. We identified causative variants in 61% of patients, variants of uncertain significance in 28%, and 10% had negative testing which is in line with expectations from the literature. The patient surveys showed high satisfaction rates with the MGT pathway. LIMITATIONS: This report is an evaluation of a new genetic testing pathway restricted to a single, publicly funded health care center. The MGT pathway involved a prospective collection of a limited number of patients with ADPKD with comparison to a retrospective cohort of patients with ADPKD evaluated by standard testing. IMPLICATIONS: A MGT pathway using clearly defined criteria and commercially available gene panels for ADPKD can be successfully implemented in a publicly funded health care system to reduce the time required to obtain genetic results.
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spelling pubmed-85585952021-11-02 Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease Elliott, Mark D. James, Leslie C. Simms, Emily L. Sharma, Priyana Girard, Louis P. Cheema, Kim Elliott, Meghan J. Lauzon, Julie L. Chun, Justin Can J Kidney Health Dis Program Report PURPOSE: Genetic testing results are currently obtained approximately 1 year after referral to a medical genetics team for autosomal dominant polycystic kidney disease (ADPKD). We evaluated a mainstream genetic testing (MGT) pathway whereby the nephrology team provided pre-test counseling and selection of patients with suspected ADPKD for genetic testing prior to direct patient interaction by a medical geneticist. SOURCES OF INFORMATION: A multidisciplinary team of nephrologists, genetic counselors, and medical geneticists developed an MGT pathway for ADPKD using current testing criteria for adult patient with suspected ADPKD and literature from MGT in oncology. METHODS: An MGT pathway was assessed using a prospective cohort and compared to a retrospective cohort of 56 patients with ADPKD who received genetic testing using the standard, traditional pathway prior to implementing the MGT for ADPKD. The mainstream pathway was evaluated using time to diagnosis, diagnostic yield, and a patient survey to assess patient perceptions of the MGT pathway. KEY FINDINGS: We assessed 26 patients with ADPKD using the MGT and 18 underwent genetic testing with return of results. Of them, 52 patients had data available for analysis in the traditional control cohort. The time for return of results using our MGT pathway was significantly shorter with a median time to results of 6 months compared to 12 months for the traditional pathway. We identified causative variants in 61% of patients, variants of uncertain significance in 28%, and 10% had negative testing which is in line with expectations from the literature. The patient surveys showed high satisfaction rates with the MGT pathway. LIMITATIONS: This report is an evaluation of a new genetic testing pathway restricted to a single, publicly funded health care center. The MGT pathway involved a prospective collection of a limited number of patients with ADPKD with comparison to a retrospective cohort of patients with ADPKD evaluated by standard testing. IMPLICATIONS: A MGT pathway using clearly defined criteria and commercially available gene panels for ADPKD can be successfully implemented in a publicly funded health care system to reduce the time required to obtain genetic results. SAGE Publications 2021-10-29 /pmc/articles/PMC8558595/ /pubmed/34733539 http://dx.doi.org/10.1177/20543581211055001 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (https://creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access page (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Program Report
Elliott, Mark D.
James, Leslie C.
Simms, Emily L.
Sharma, Priyana
Girard, Louis P.
Cheema, Kim
Elliott, Meghan J.
Lauzon, Julie L.
Chun, Justin
Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease
title Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease
title_full Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease
title_fullStr Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease
title_full_unstemmed Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease
title_short Mainstreaming Genetic Testing for Adult Patients With Autosomal Dominant Polycystic Kidney Disease
title_sort mainstreaming genetic testing for adult patients with autosomal dominant polycystic kidney disease
topic Program Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558595/
https://www.ncbi.nlm.nih.gov/pubmed/34733539
http://dx.doi.org/10.1177/20543581211055001
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