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Variation in nuclear genome size within the Eisenia nordenskioldi complex (Lumbricidae, Annelida)
The size of the nuclear genome in eukaryotes is mostly determined by mobile elements and noncoding sequences and may vary within wide limits. It can differ signif icantly both among higher-order taxa and closely related species within a genus; genome size is known to be uncorrelated with organism co...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Federal Research Center Institute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558923/ https://www.ncbi.nlm.nih.gov/pubmed/34782884 http://dx.doi.org/10.18699/VJ21.073 |
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author | Shekhovtsov, S.V. Efremov, Ya.R. Poluboyarova, T.V. Peltek1, S.E. |
author_facet | Shekhovtsov, S.V. Efremov, Ya.R. Poluboyarova, T.V. Peltek1, S.E. |
author_sort | Shekhovtsov, S.V. |
collection | PubMed |
description | The size of the nuclear genome in eukaryotes is mostly determined by mobile elements and noncoding sequences and may vary within wide limits. It can differ signif icantly both among higher-order taxa and closely related species within a genus; genome size is known to be uncorrelated with organism complexity (the so-called C-paradox). Less is known about intraspecif ic variation of this parameter. Typically, genome size is stable within a species, and the known exceptions turn out be cryptic taxa. The Eisenia nordenskioldi complex encompasses several closely related earthworm species. They are widely distributed in the Urals, Siberia, and the Russian Far East, as well as adjacent regions. This complex is characterized by signif icant morphological, chromosomal, ecological, and genetic variation. The aim of our study was to estimate the nuclear genome size in several genetic lineages of the E. nordenskioldi complex using f low cytometry. The genome size in different genetic lineages differed strongly, which supports the hypothesis that they are separate species. We found two groups of lineages, with small (250–500 Mbp) and large (2300–3500 Mbp) genomes. Moreover, different populations within one lineage also demonstrated variation in genome size (15–25 %). We compared the obtained data to phylogenetic trees based on transcriptome data. Genome size in ancestral population was more likely to be big. It increased or decreased independently in different lineages, and these processes could be associated with changes in genome size and/or transition to endogeic lifestyle. |
format | Online Article Text |
id | pubmed-8558923 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Federal Research Center Institute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-85589232021-11-14 Variation in nuclear genome size within the Eisenia nordenskioldi complex (Lumbricidae, Annelida) Shekhovtsov, S.V. Efremov, Ya.R. Poluboyarova, T.V. Peltek1, S.E. Vavilovskii Zhurnal Genet Selektsii Original Article The size of the nuclear genome in eukaryotes is mostly determined by mobile elements and noncoding sequences and may vary within wide limits. It can differ signif icantly both among higher-order taxa and closely related species within a genus; genome size is known to be uncorrelated with organism complexity (the so-called C-paradox). Less is known about intraspecif ic variation of this parameter. Typically, genome size is stable within a species, and the known exceptions turn out be cryptic taxa. The Eisenia nordenskioldi complex encompasses several closely related earthworm species. They are widely distributed in the Urals, Siberia, and the Russian Far East, as well as adjacent regions. This complex is characterized by signif icant morphological, chromosomal, ecological, and genetic variation. The aim of our study was to estimate the nuclear genome size in several genetic lineages of the E. nordenskioldi complex using f low cytometry. The genome size in different genetic lineages differed strongly, which supports the hypothesis that they are separate species. We found two groups of lineages, with small (250–500 Mbp) and large (2300–3500 Mbp) genomes. Moreover, different populations within one lineage also demonstrated variation in genome size (15–25 %). We compared the obtained data to phylogenetic trees based on transcriptome data. Genome size in ancestral population was more likely to be big. It increased or decreased independently in different lineages, and these processes could be associated with changes in genome size and/or transition to endogeic lifestyle. The Federal Research Center Institute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences 2021-10 /pmc/articles/PMC8558923/ /pubmed/34782884 http://dx.doi.org/10.18699/VJ21.073 Text en Copyright © AUTHORS https://creativecommons.org/licenses/by/2.5/This work is licensed under a Creative Commons Attribution 4.0 License |
spellingShingle | Original Article Shekhovtsov, S.V. Efremov, Ya.R. Poluboyarova, T.V. Peltek1, S.E. Variation in nuclear genome size within the Eisenia nordenskioldi complex (Lumbricidae, Annelida) |
title | Variation in nuclear genome size within the Eisenia nordenskioldi
complex (Lumbricidae, Annelida) |
title_full | Variation in nuclear genome size within the Eisenia nordenskioldi
complex (Lumbricidae, Annelida) |
title_fullStr | Variation in nuclear genome size within the Eisenia nordenskioldi
complex (Lumbricidae, Annelida) |
title_full_unstemmed | Variation in nuclear genome size within the Eisenia nordenskioldi
complex (Lumbricidae, Annelida) |
title_short | Variation in nuclear genome size within the Eisenia nordenskioldi
complex (Lumbricidae, Annelida) |
title_sort | variation in nuclear genome size within the eisenia nordenskioldi
complex (lumbricidae, annelida) |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8558923/ https://www.ncbi.nlm.nih.gov/pubmed/34782884 http://dx.doi.org/10.18699/VJ21.073 |
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