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COVID-19 diagnosis from routine blood tests using artificial intelligence techniques

Coronavirus disease (COVID-19) is a unique worldwide pandemic. With new mutations of the virus with higher transmission rates, it is imperative to diagnose positive cases as quickly and accurately as possible. Therefore, a fast, accurate, and automatic system for COVID-19 diagnosis can be very usefu...

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Detalles Bibliográficos
Autores principales: Babaei Rikan, Samin, Sorayaie Azar, Amir, Ghafari, Ali, Bagherzadeh Mohasefi, Jamshid, Pirnejad, Habibollah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8559794/
https://www.ncbi.nlm.nih.gov/pubmed/34745318
http://dx.doi.org/10.1016/j.bspc.2021.103263
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author Babaei Rikan, Samin
Sorayaie Azar, Amir
Ghafari, Ali
Bagherzadeh Mohasefi, Jamshid
Pirnejad, Habibollah
author_facet Babaei Rikan, Samin
Sorayaie Azar, Amir
Ghafari, Ali
Bagherzadeh Mohasefi, Jamshid
Pirnejad, Habibollah
author_sort Babaei Rikan, Samin
collection PubMed
description Coronavirus disease (COVID-19) is a unique worldwide pandemic. With new mutations of the virus with higher transmission rates, it is imperative to diagnose positive cases as quickly and accurately as possible. Therefore, a fast, accurate, and automatic system for COVID-19 diagnosis can be very useful for clinicians. In this study, seven machine learning and four deep learning models were presented to diagnose positive cases of COVID-19 from three routine laboratory blood tests datasets. Three correlation coefficient methods, i.e., Pearson, Spearman, and Kendall, were used to demonstrate the relevance among samples. A four-fold cross-validation method was used to train, validate, and test the proposed models. In all three datasets, the proposed deep neural network (DNN) model achieved the highest values of accuracy, precision, recall or sensitivity, specificity, F1-Score, AUC, and MCC. On average, accuracy 92.11%, specificity 84.56%, and AUC 92.20% values have been obtained in the first dataset. In the second dataset, on average, accuracy 93.16%, specificity 93.02%, and AUC 93.20% values have been obtained. Finally, in the third dataset, on average, the values of accuracy 92.5%, specificity 85%, and AUC 92.20% have been obtained. In this study, we used a statistical t-test to validate the results. Finally, using artificial intelligence interpretation methods, important and impactful features in the developed model were presented. The proposed DNN model can be used as a supplementary tool for diagnosing COVID-19, which can quickly provide clinicians with highly accurate diagnoses of positive cases in a timely manner.
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spelling pubmed-85597942021-11-02 COVID-19 diagnosis from routine blood tests using artificial intelligence techniques Babaei Rikan, Samin Sorayaie Azar, Amir Ghafari, Ali Bagherzadeh Mohasefi, Jamshid Pirnejad, Habibollah Biomed Signal Process Control Article Coronavirus disease (COVID-19) is a unique worldwide pandemic. With new mutations of the virus with higher transmission rates, it is imperative to diagnose positive cases as quickly and accurately as possible. Therefore, a fast, accurate, and automatic system for COVID-19 diagnosis can be very useful for clinicians. In this study, seven machine learning and four deep learning models were presented to diagnose positive cases of COVID-19 from three routine laboratory blood tests datasets. Three correlation coefficient methods, i.e., Pearson, Spearman, and Kendall, were used to demonstrate the relevance among samples. A four-fold cross-validation method was used to train, validate, and test the proposed models. In all three datasets, the proposed deep neural network (DNN) model achieved the highest values of accuracy, precision, recall or sensitivity, specificity, F1-Score, AUC, and MCC. On average, accuracy 92.11%, specificity 84.56%, and AUC 92.20% values have been obtained in the first dataset. In the second dataset, on average, accuracy 93.16%, specificity 93.02%, and AUC 93.20% values have been obtained. Finally, in the third dataset, on average, the values of accuracy 92.5%, specificity 85%, and AUC 92.20% have been obtained. In this study, we used a statistical t-test to validate the results. Finally, using artificial intelligence interpretation methods, important and impactful features in the developed model were presented. The proposed DNN model can be used as a supplementary tool for diagnosing COVID-19, which can quickly provide clinicians with highly accurate diagnoses of positive cases in a timely manner. Elsevier Ltd. 2022-02 2021-11-01 /pmc/articles/PMC8559794/ /pubmed/34745318 http://dx.doi.org/10.1016/j.bspc.2021.103263 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Babaei Rikan, Samin
Sorayaie Azar, Amir
Ghafari, Ali
Bagherzadeh Mohasefi, Jamshid
Pirnejad, Habibollah
COVID-19 diagnosis from routine blood tests using artificial intelligence techniques
title COVID-19 diagnosis from routine blood tests using artificial intelligence techniques
title_full COVID-19 diagnosis from routine blood tests using artificial intelligence techniques
title_fullStr COVID-19 diagnosis from routine blood tests using artificial intelligence techniques
title_full_unstemmed COVID-19 diagnosis from routine blood tests using artificial intelligence techniques
title_short COVID-19 diagnosis from routine blood tests using artificial intelligence techniques
title_sort covid-19 diagnosis from routine blood tests using artificial intelligence techniques
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8559794/
https://www.ncbi.nlm.nih.gov/pubmed/34745318
http://dx.doi.org/10.1016/j.bspc.2021.103263
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