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Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments

Short-term reattendances to emergency departments are a key quality of care indicator. Identifying patients at increased risk of early reattendance could help reduce the number of missed critical illnesses and could reduce avoidable utilization of emergency departments by enabling targeted post-disc...

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Autores principales: Chmiel, F. P., Burns, D. K., Azor, M., Borca, F., Boniface, M. J., Zlatev, Z. D., White, N. M., Daniels, T. W. V., Kiuber, M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8563762/
https://www.ncbi.nlm.nih.gov/pubmed/34728706
http://dx.doi.org/10.1038/s41598-021-00937-9
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author Chmiel, F. P.
Burns, D. K.
Azor, M.
Borca, F.
Boniface, M. J.
Zlatev, Z. D.
White, N. M.
Daniels, T. W. V.
Kiuber, M.
author_facet Chmiel, F. P.
Burns, D. K.
Azor, M.
Borca, F.
Boniface, M. J.
Zlatev, Z. D.
White, N. M.
Daniels, T. W. V.
Kiuber, M.
author_sort Chmiel, F. P.
collection PubMed
description Short-term reattendances to emergency departments are a key quality of care indicator. Identifying patients at increased risk of early reattendance could help reduce the number of missed critical illnesses and could reduce avoidable utilization of emergency departments by enabling targeted post-discharge intervention. In this manuscript, we present a retrospective, single-centre study where we created and evaluated an extreme gradient boosting decision tree model trained to identify patients at risk of reattendance within 72 h of discharge from an emergency department (University Hospitals Southampton Foundation Trust, UK). Our model was trained using 35,447 attendances by 28,945 patients and evaluated on a hold-out test set featuring 8847 attendances by 7237 patients. The set of attendances from a given patient appeared exclusively in either the training or the test set. Our model was trained using both visit level variables (e.g., vital signs, arrival mode, and chief complaint) and a set of variables available in a patients electronic patient record, such as age and any recorded medical conditions. On the hold-out test set, our highest performing model obtained an AUROC of 0.747 (95% CI 0.722–0.773) and an average precision of 0.233 (95% CI 0.194–0.277). These results demonstrate that machine-learning models can be used to classify patients, with moderate performance, into low and high-risk groups for reattendance. We explained our models predictions using SHAP values, a concept developed from coalitional game theory, capable of explaining predictions at an attendance level. We demonstrated how clustering techniques (the UMAP algorithm) can be used to investigate the different sub-groups of explanations present in our patient cohort.
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spelling pubmed-85637622021-11-04 Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments Chmiel, F. P. Burns, D. K. Azor, M. Borca, F. Boniface, M. J. Zlatev, Z. D. White, N. M. Daniels, T. W. V. Kiuber, M. Sci Rep Article Short-term reattendances to emergency departments are a key quality of care indicator. Identifying patients at increased risk of early reattendance could help reduce the number of missed critical illnesses and could reduce avoidable utilization of emergency departments by enabling targeted post-discharge intervention. In this manuscript, we present a retrospective, single-centre study where we created and evaluated an extreme gradient boosting decision tree model trained to identify patients at risk of reattendance within 72 h of discharge from an emergency department (University Hospitals Southampton Foundation Trust, UK). Our model was trained using 35,447 attendances by 28,945 patients and evaluated on a hold-out test set featuring 8847 attendances by 7237 patients. The set of attendances from a given patient appeared exclusively in either the training or the test set. Our model was trained using both visit level variables (e.g., vital signs, arrival mode, and chief complaint) and a set of variables available in a patients electronic patient record, such as age and any recorded medical conditions. On the hold-out test set, our highest performing model obtained an AUROC of 0.747 (95% CI 0.722–0.773) and an average precision of 0.233 (95% CI 0.194–0.277). These results demonstrate that machine-learning models can be used to classify patients, with moderate performance, into low and high-risk groups for reattendance. We explained our models predictions using SHAP values, a concept developed from coalitional game theory, capable of explaining predictions at an attendance level. We demonstrated how clustering techniques (the UMAP algorithm) can be used to investigate the different sub-groups of explanations present in our patient cohort. Nature Publishing Group UK 2021-11-02 /pmc/articles/PMC8563762/ /pubmed/34728706 http://dx.doi.org/10.1038/s41598-021-00937-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Chmiel, F. P.
Burns, D. K.
Azor, M.
Borca, F.
Boniface, M. J.
Zlatev, Z. D.
White, N. M.
Daniels, T. W. V.
Kiuber, M.
Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments
title Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments
title_full Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments
title_fullStr Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments
title_full_unstemmed Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments
title_short Using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments
title_sort using explainable machine learning to identify patients at risk of reattendance at discharge from emergency departments
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8563762/
https://www.ncbi.nlm.nih.gov/pubmed/34728706
http://dx.doi.org/10.1038/s41598-021-00937-9
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