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Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)

Auxin/indoleacetic acid (Aux/IAA) family genes respond to the hormone auxin, which have been implicated in the regulation of multiple biological processes. In this study, all 25 Aux/IAA family genes were identified in Tartary buckwheat (Fagopyrum tataricum) by a reiterative database search and manua...

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Autores principales: Yang, Fan, Zhang, Xiuxia, Tian, Ruifeng, Zhu, Liwei, Liu, Fang, Chen, Qingfu, Shi, Xuanjie, Huo, Dongao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8564212/
https://www.ncbi.nlm.nih.gov/pubmed/34746298
http://dx.doi.org/10.1155/2021/3102399
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author Yang, Fan
Zhang, Xiuxia
Tian, Ruifeng
Zhu, Liwei
Liu, Fang
Chen, Qingfu
Shi, Xuanjie
Huo, Dongao
author_facet Yang, Fan
Zhang, Xiuxia
Tian, Ruifeng
Zhu, Liwei
Liu, Fang
Chen, Qingfu
Shi, Xuanjie
Huo, Dongao
author_sort Yang, Fan
collection PubMed
description Auxin/indoleacetic acid (Aux/IAA) family genes respond to the hormone auxin, which have been implicated in the regulation of multiple biological processes. In this study, all 25 Aux/IAA family genes were identified in Tartary buckwheat (Fagopyrum tataricum) by a reiterative database search and manual annotation. Our study provided comprehensive information of Aux/IAA family genes in buckwheat, including gene structures, chromosome locations, phylogenetic relationships, and expression patterns. Aux/IAA family genes were nonuniformly distributed in the buckwheat chromosomes and divided into seven groups by phylogenetic analysis. Aux/IAA family genes maintained a certain correlation and a certain species-specificity through evolutionary analysis with Arabidopsis and other grain crops. In addition, all Aux/IAA genes showed a complex response pattern under treatment of indole-3-acetic acid (IAA). These results provide valuable reference information for dissecting function and molecular mechanism of Aux/IAA family genes in buckwheat.
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spelling pubmed-85642122021-11-04 Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum) Yang, Fan Zhang, Xiuxia Tian, Ruifeng Zhu, Liwei Liu, Fang Chen, Qingfu Shi, Xuanjie Huo, Dongao Int J Genomics Research Article Auxin/indoleacetic acid (Aux/IAA) family genes respond to the hormone auxin, which have been implicated in the regulation of multiple biological processes. In this study, all 25 Aux/IAA family genes were identified in Tartary buckwheat (Fagopyrum tataricum) by a reiterative database search and manual annotation. Our study provided comprehensive information of Aux/IAA family genes in buckwheat, including gene structures, chromosome locations, phylogenetic relationships, and expression patterns. Aux/IAA family genes were nonuniformly distributed in the buckwheat chromosomes and divided into seven groups by phylogenetic analysis. Aux/IAA family genes maintained a certain correlation and a certain species-specificity through evolutionary analysis with Arabidopsis and other grain crops. In addition, all Aux/IAA genes showed a complex response pattern under treatment of indole-3-acetic acid (IAA). These results provide valuable reference information for dissecting function and molecular mechanism of Aux/IAA family genes in buckwheat. Hindawi 2021-10-26 /pmc/articles/PMC8564212/ /pubmed/34746298 http://dx.doi.org/10.1155/2021/3102399 Text en Copyright © 2021 Fan Yang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Yang, Fan
Zhang, Xiuxia
Tian, Ruifeng
Zhu, Liwei
Liu, Fang
Chen, Qingfu
Shi, Xuanjie
Huo, Dongao
Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)
title Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)
title_full Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)
title_fullStr Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)
title_full_unstemmed Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)
title_short Genome-Wide Analysis of the Auxin/Indoleacetic Acid Gene Family and Response to Indole-3-Acetic Acid Stress in Tartary Buckwheat (Fagopyrum tataricum)
title_sort genome-wide analysis of the auxin/indoleacetic acid gene family and response to indole-3-acetic acid stress in tartary buckwheat (fagopyrum tataricum)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8564212/
https://www.ncbi.nlm.nih.gov/pubmed/34746298
http://dx.doi.org/10.1155/2021/3102399
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