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Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf

Lactobacillus amylovorus are known to exist in the intestinal flora of healthy cattle or pigs. The L. amylovorus strain 1394N20 was isolated from the feces of the Hanwoo calf (Bos taurus coreanae). The genome of strain 1394N20 consists of a single circular chromosome (2,176,326 bp) with overall guan...

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Autores principales: Oh, Young Joon, Kim, Joon Yong, Lee, Jieun, Lim, Seul Ki, Yu, Dohyeon, Oh, Yeon-su, Park, Jinho, Choi, Hak-Jong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korean Society of Animal Sciences and Technology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8564313/
https://www.ncbi.nlm.nih.gov/pubmed/34796359
http://dx.doi.org/10.5187/jast.2021.e100
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author Oh, Young Joon
Kim, Joon Yong
Lee, Jieun
Lim, Seul Ki
Yu, Dohyeon
Oh, Yeon-su
Park, Jinho
Choi, Hak-Jong
author_facet Oh, Young Joon
Kim, Joon Yong
Lee, Jieun
Lim, Seul Ki
Yu, Dohyeon
Oh, Yeon-su
Park, Jinho
Choi, Hak-Jong
author_sort Oh, Young Joon
collection PubMed
description Lactobacillus amylovorus are known to exist in the intestinal flora of healthy cattle or pigs. The L. amylovorus strain 1394N20 was isolated from the feces of the Hanwoo calf (Bos taurus coreanae). The genome of strain 1394N20 consists of a single circular chromosome (2,176,326 bp) with overall guanine + cytosine content of 37.8 mol%. Moreover, 2,281 protein-coding sequences, 15 rRNAs, and 65 tRNAs genes were identified in the chromosome based on the results of annotation. The bacterium has a gene encoding endoglucanase, an enzyme that hydrolyzes the 1,4-β-D-glycosidic linkages in cellulose, hemicellulose, lichenin, and cereal β-D-glucans. Genomic sequencing of L. amylovorus strain 1394N20 reveals the immense potential of the strain as a probiotic with nutrient digestibility.
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spelling pubmed-85643132021-11-17 Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf Oh, Young Joon Kim, Joon Yong Lee, Jieun Lim, Seul Ki Yu, Dohyeon Oh, Yeon-su Park, Jinho Choi, Hak-Jong J Anim Sci Technol Research Article Lactobacillus amylovorus are known to exist in the intestinal flora of healthy cattle or pigs. The L. amylovorus strain 1394N20 was isolated from the feces of the Hanwoo calf (Bos taurus coreanae). The genome of strain 1394N20 consists of a single circular chromosome (2,176,326 bp) with overall guanine + cytosine content of 37.8 mol%. Moreover, 2,281 protein-coding sequences, 15 rRNAs, and 65 tRNAs genes were identified in the chromosome based on the results of annotation. The bacterium has a gene encoding endoglucanase, an enzyme that hydrolyzes the 1,4-β-D-glycosidic linkages in cellulose, hemicellulose, lichenin, and cereal β-D-glucans. Genomic sequencing of L. amylovorus strain 1394N20 reveals the immense potential of the strain as a probiotic with nutrient digestibility. Korean Society of Animal Sciences and Technology 2021-09 2021-09-30 /pmc/articles/PMC8564313/ /pubmed/34796359 http://dx.doi.org/10.5187/jast.2021.e100 Text en © Copyright 2021 Korean Society of Animal Science and Technology https://creativecommons.org/licenses/by-nc/4.0/This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Oh, Young Joon
Kim, Joon Yong
Lee, Jieun
Lim, Seul Ki
Yu, Dohyeon
Oh, Yeon-su
Park, Jinho
Choi, Hak-Jong
Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf
title Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf
title_full Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf
title_fullStr Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf
title_full_unstemmed Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf
title_short Complete genome sequence of Lactobacillus amylovorus 1394N20, a potential probiotic strain, isolated from a Hanwoo calf
title_sort complete genome sequence of lactobacillus amylovorus 1394n20, a potential probiotic strain, isolated from a hanwoo calf
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8564313/
https://www.ncbi.nlm.nih.gov/pubmed/34796359
http://dx.doi.org/10.5187/jast.2021.e100
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