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An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes

The cell cultivation process in a bioreactor is a high-value manufacturing process that requires excessive monitoring and control compatibility. The specific cell growth rate is a crucial parameter that describes the online quality of the cultivation process. Most methods and algorithms developed fo...

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Detalles Bibliográficos
Autores principales: Survyla, Arnas, Levisauskas, Donatas, Urniezius, Renaldas, Simutis, Rimvydas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Research Network of Computational and Structural Biotechnology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8564730/
https://www.ncbi.nlm.nih.gov/pubmed/34765100
http://dx.doi.org/10.1016/j.csbj.2021.10.015
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author Survyla, Arnas
Levisauskas, Donatas
Urniezius, Renaldas
Simutis, Rimvydas
author_facet Survyla, Arnas
Levisauskas, Donatas
Urniezius, Renaldas
Simutis, Rimvydas
author_sort Survyla, Arnas
collection PubMed
description The cell cultivation process in a bioreactor is a high-value manufacturing process that requires excessive monitoring and control compatibility. The specific cell growth rate is a crucial parameter that describes the online quality of the cultivation process. Most methods and algorithms developed for online estimations of the specific growth rate controls in batch and fed-batch microbial cultivation processes rely on biomass growth models. In this paper, we present a soft sensor – a specific growth rate estimator that does not require a particular bioprocess model. The approach for online estimation of the specific growth rate is based on an online measurement of the oxygen uptake rate. The feasibility of the estimator developed in this study was determined in two ways. First, we used numerical simulations on a virtual platform, where the cell culture processes were theoretically modeled. Next, we performed experimental validation based on laboratory-scale (7, 12, 15 L) bioreactor experiments with three different Escherichia coli BL21 cell strains.
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spelling pubmed-85647302021-11-10 An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes Survyla, Arnas Levisauskas, Donatas Urniezius, Renaldas Simutis, Rimvydas Comput Struct Biotechnol J Research Article The cell cultivation process in a bioreactor is a high-value manufacturing process that requires excessive monitoring and control compatibility. The specific cell growth rate is a crucial parameter that describes the online quality of the cultivation process. Most methods and algorithms developed for online estimations of the specific growth rate controls in batch and fed-batch microbial cultivation processes rely on biomass growth models. In this paper, we present a soft sensor – a specific growth rate estimator that does not require a particular bioprocess model. The approach for online estimation of the specific growth rate is based on an online measurement of the oxygen uptake rate. The feasibility of the estimator developed in this study was determined in two ways. First, we used numerical simulations on a virtual platform, where the cell culture processes were theoretically modeled. Next, we performed experimental validation based on laboratory-scale (7, 12, 15 L) bioreactor experiments with three different Escherichia coli BL21 cell strains. Research Network of Computational and Structural Biotechnology 2021-10-19 /pmc/articles/PMC8564730/ /pubmed/34765100 http://dx.doi.org/10.1016/j.csbj.2021.10.015 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Survyla, Arnas
Levisauskas, Donatas
Urniezius, Renaldas
Simutis, Rimvydas
An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes
title An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes
title_full An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes
title_fullStr An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes
title_full_unstemmed An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes
title_short An oxygen-uptake-rate-based estimator of the specific growth rate in Escherichia coli BL21 strains cultivation processes
title_sort oxygen-uptake-rate-based estimator of the specific growth rate in escherichia coli bl21 strains cultivation processes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8564730/
https://www.ncbi.nlm.nih.gov/pubmed/34765100
http://dx.doi.org/10.1016/j.csbj.2021.10.015
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