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Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa

UCYN-A is one of the most widespread and important marine diazotrophs. Its unusual distribution in both cold/warm and coastal/oceanic waters challenges current understanding about what drives the biogeography of diazotrophs. This study assessed the community assembly processes of the nitrogen-fixing...

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Autores principales: Li, Liuyang, Wu, Chao, Huang, Danyue, Ding, Changling, Wei, Yuqiu, Sun, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8566894/
https://www.ncbi.nlm.nih.gov/pubmed/34745020
http://dx.doi.org/10.3389/fmicb.2021.654646
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author Li, Liuyang
Wu, Chao
Huang, Danyue
Ding, Changling
Wei, Yuqiu
Sun, Jun
author_facet Li, Liuyang
Wu, Chao
Huang, Danyue
Ding, Changling
Wei, Yuqiu
Sun, Jun
author_sort Li, Liuyang
collection PubMed
description UCYN-A is one of the most widespread and important marine diazotrophs. Its unusual distribution in both cold/warm and coastal/oceanic waters challenges current understanding about what drives the biogeography of diazotrophs. This study assessed the community assembly processes of the nitrogen-fixing cyanobacterium UCYN-A, developing a framework of assembly processes underpinning the microbial biogeography and diversity. High-throughput sequencing and a qPCR approach targeting the nifH gene were used to investigate three tropical seas: the Bay of Bengal, the Western Pacific Ocean, and the South China Sea. Based on the neutral community model and two types of null models calculating the β-nearest taxon index and the normalized stochasticity ratio, we found that stochastic assembly processes could explain 66–92% of the community assembly; thus, they exert overwhelming influence on UCYN-A biogeography and diversity. Among the deterministic processes, temperature and coastal/oceanic position appeared to be the principal environmental factors driving UCYN-A diversity. In addition, a close linkage between assembly processes and UCYN-A abundance/diversity/drivers can provide clues for the unusual global distribution of UCYN-A.
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spelling pubmed-85668942021-11-05 Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa Li, Liuyang Wu, Chao Huang, Danyue Ding, Changling Wei, Yuqiu Sun, Jun Front Microbiol Microbiology UCYN-A is one of the most widespread and important marine diazotrophs. Its unusual distribution in both cold/warm and coastal/oceanic waters challenges current understanding about what drives the biogeography of diazotrophs. This study assessed the community assembly processes of the nitrogen-fixing cyanobacterium UCYN-A, developing a framework of assembly processes underpinning the microbial biogeography and diversity. High-throughput sequencing and a qPCR approach targeting the nifH gene were used to investigate three tropical seas: the Bay of Bengal, the Western Pacific Ocean, and the South China Sea. Based on the neutral community model and two types of null models calculating the β-nearest taxon index and the normalized stochasticity ratio, we found that stochastic assembly processes could explain 66–92% of the community assembly; thus, they exert overwhelming influence on UCYN-A biogeography and diversity. Among the deterministic processes, temperature and coastal/oceanic position appeared to be the principal environmental factors driving UCYN-A diversity. In addition, a close linkage between assembly processes and UCYN-A abundance/diversity/drivers can provide clues for the unusual global distribution of UCYN-A. Frontiers Media S.A. 2021-10-21 /pmc/articles/PMC8566894/ /pubmed/34745020 http://dx.doi.org/10.3389/fmicb.2021.654646 Text en Copyright © 2021 Li, Wu, Huang, Ding, Wei and Sun. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Li, Liuyang
Wu, Chao
Huang, Danyue
Ding, Changling
Wei, Yuqiu
Sun, Jun
Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa
title Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa
title_full Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa
title_fullStr Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa
title_full_unstemmed Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa
title_short Integrating Stochastic and Deterministic Process in the Biogeography of N(2)-Fixing Cyanobacterium Candidatus Atelocyanobacterium Thalassa
title_sort integrating stochastic and deterministic process in the biogeography of n(2)-fixing cyanobacterium candidatus atelocyanobacterium thalassa
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8566894/
https://www.ncbi.nlm.nih.gov/pubmed/34745020
http://dx.doi.org/10.3389/fmicb.2021.654646
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