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Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam
Different rice farming systems affect the soil microbial communities. Here, we report the results of 16S rRNA gene amplicon sequencing of soils collected from intensive rice cultivation and rice-shrimp farming systems in Soc Trang, Vietnam. The dominant phyla in these systems were Firmicutes, Actino...
| Autores principales: | , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
American Society for Microbiology
2021
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567788/ https://www.ncbi.nlm.nih.gov/pubmed/34734766 http://dx.doi.org/10.1128/MRA.00595-21 |
| _version_ | 1784594302607818752 |
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| author | Do, Thi-Xuan Huynh, Van-Phuc Le, Lan-Anh Nguyen, Thuy-Vy Nguyen-Pham, Anh-Thi Bui-Thi, Minh-Dieu Chau-Thi, Anh-Thy Tran, Sy-Nam Nguyen, Van-Thanh Ho-Huynh, Thuy-Duong |
| author_facet | Do, Thi-Xuan Huynh, Van-Phuc Le, Lan-Anh Nguyen, Thuy-Vy Nguyen-Pham, Anh-Thi Bui-Thi, Minh-Dieu Chau-Thi, Anh-Thy Tran, Sy-Nam Nguyen, Van-Thanh Ho-Huynh, Thuy-Duong |
| author_sort | Do, Thi-Xuan |
| collection | PubMed |
| description | Different rice farming systems affect the soil microbial communities. Here, we report the results of 16S rRNA gene amplicon sequencing of soils collected from intensive rice cultivation and rice-shrimp farming systems in Soc Trang, Vietnam. The dominant phyla in these systems were Firmicutes, Actinobacteriota, Chloroflexi, Myxococcota, and Acidobacteriota. |
| format | Online Article Text |
| id | pubmed-8567788 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2021 |
| publisher | American Society for Microbiology |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-85677882021-11-18 Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam Do, Thi-Xuan Huynh, Van-Phuc Le, Lan-Anh Nguyen, Thuy-Vy Nguyen-Pham, Anh-Thi Bui-Thi, Minh-Dieu Chau-Thi, Anh-Thy Tran, Sy-Nam Nguyen, Van-Thanh Ho-Huynh, Thuy-Duong Microbiol Resour Announc Amplicon Sequence Collections Different rice farming systems affect the soil microbial communities. Here, we report the results of 16S rRNA gene amplicon sequencing of soils collected from intensive rice cultivation and rice-shrimp farming systems in Soc Trang, Vietnam. The dominant phyla in these systems were Firmicutes, Actinobacteriota, Chloroflexi, Myxococcota, and Acidobacteriota. American Society for Microbiology 2021-11-04 /pmc/articles/PMC8567788/ /pubmed/34734766 http://dx.doi.org/10.1128/MRA.00595-21 Text en Copyright © 2021 Do et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) . |
| spellingShingle | Amplicon Sequence Collections Do, Thi-Xuan Huynh, Van-Phuc Le, Lan-Anh Nguyen, Thuy-Vy Nguyen-Pham, Anh-Thi Bui-Thi, Minh-Dieu Chau-Thi, Anh-Thy Tran, Sy-Nam Nguyen, Van-Thanh Ho-Huynh, Thuy-Duong Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam |
| title | Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam |
| title_full | Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam |
| title_fullStr | Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam |
| title_full_unstemmed | Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam |
| title_short | Microbial Diversity Analysis Using 16S rRNA Gene Amplicon Sequencing of Rhizosphere Soils from Double-Cropping Rice and Rice-Shrimp Farming Systems in Soc Trang, Vietnam |
| title_sort | microbial diversity analysis using 16s rrna gene amplicon sequencing of rhizosphere soils from double-cropping rice and rice-shrimp farming systems in soc trang, vietnam |
| topic | Amplicon Sequence Collections |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567788/ https://www.ncbi.nlm.nih.gov/pubmed/34734766 http://dx.doi.org/10.1128/MRA.00595-21 |
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