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Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis

A structural covariance network (SCN) has been used successfully in structural magnetic resonance imaging (sMRI) studies. However, most SCNs have been constructed by a unitary marker that is insensitive for discriminating different disease phases. The aim of this study was to devise a novel regional...

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Autores principales: Zhao, Kun, Zheng, Qiang, Che, Tongtong, Dyrba, Martin, Li, Qiongling, Ding, Yanhui, Zheng, Yuanjie, Liu, Yong, Li, Shuyu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MIT Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567836/
https://www.ncbi.nlm.nih.gov/pubmed/34746627
http://dx.doi.org/10.1162/netn_a_00200
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author Zhao, Kun
Zheng, Qiang
Che, Tongtong
Dyrba, Martin
Li, Qiongling
Ding, Yanhui
Zheng, Yuanjie
Liu, Yong
Li, Shuyu
author_facet Zhao, Kun
Zheng, Qiang
Che, Tongtong
Dyrba, Martin
Li, Qiongling
Ding, Yanhui
Zheng, Yuanjie
Liu, Yong
Li, Shuyu
author_sort Zhao, Kun
collection PubMed
description A structural covariance network (SCN) has been used successfully in structural magnetic resonance imaging (sMRI) studies. However, most SCNs have been constructed by a unitary marker that is insensitive for discriminating different disease phases. The aim of this study was to devise a novel regional radiomics similarity network (R2SN) that could provide more comprehensive information in morphological network analysis. R2SNs were constructed by computing the Pearson correlations between the radiomics features extracted from any pair of regions for each subject (AAL atlas). We further assessed the small-world property of R2SNs, and we evaluated the reproducibility in different datasets and through test-retest analysis. The relationships between the R2SNs and general intelligence/interregional coexpression of genes were also explored. R2SNs could be replicated in different datasets, regardless of the use of different feature subsets. R2SNs showed high reproducibility in the test-retest analysis (intraclass correlation coefficient > 0.7). In addition, the small-word property (σ > 2) and the high correlation between gene expression (R = 0.29, p < 0.001) and general intelligence were determined for R2SNs. Furthermore, the results have also been repeated in the Brainnetome atlas. R2SNs provide a novel, reliable, and biologically plausible method to understand human morphological covariance based on sMRI.
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spelling pubmed-85678362021-11-05 Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis Zhao, Kun Zheng, Qiang Che, Tongtong Dyrba, Martin Li, Qiongling Ding, Yanhui Zheng, Yuanjie Liu, Yong Li, Shuyu Netw Neurosci Research Article A structural covariance network (SCN) has been used successfully in structural magnetic resonance imaging (sMRI) studies. However, most SCNs have been constructed by a unitary marker that is insensitive for discriminating different disease phases. The aim of this study was to devise a novel regional radiomics similarity network (R2SN) that could provide more comprehensive information in morphological network analysis. R2SNs were constructed by computing the Pearson correlations between the radiomics features extracted from any pair of regions for each subject (AAL atlas). We further assessed the small-world property of R2SNs, and we evaluated the reproducibility in different datasets and through test-retest analysis. The relationships between the R2SNs and general intelligence/interregional coexpression of genes were also explored. R2SNs could be replicated in different datasets, regardless of the use of different feature subsets. R2SNs showed high reproducibility in the test-retest analysis (intraclass correlation coefficient > 0.7). In addition, the small-word property (σ > 2) and the high correlation between gene expression (R = 0.29, p < 0.001) and general intelligence were determined for R2SNs. Furthermore, the results have also been repeated in the Brainnetome atlas. R2SNs provide a novel, reliable, and biologically plausible method to understand human morphological covariance based on sMRI. MIT Press 2021-08-30 /pmc/articles/PMC8567836/ /pubmed/34746627 http://dx.doi.org/10.1162/netn_a_00200 Text en © 2021 Massachusetts Institute of Technology https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. For a full description of the license, please visit https://creativecommons.org/licenses/by/4.0/.
spellingShingle Research Article
Zhao, Kun
Zheng, Qiang
Che, Tongtong
Dyrba, Martin
Li, Qiongling
Ding, Yanhui
Zheng, Yuanjie
Liu, Yong
Li, Shuyu
Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis
title Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis
title_full Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis
title_fullStr Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis
title_full_unstemmed Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis
title_short Regional radiomics similarity networks (R2SNs) in the human brain: Reproducibility, small-world properties and a biological basis
title_sort regional radiomics similarity networks (r2sns) in the human brain: reproducibility, small-world properties and a biological basis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567836/
https://www.ncbi.nlm.nih.gov/pubmed/34746627
http://dx.doi.org/10.1162/netn_a_00200
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