The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae)

Sida szechuensis Matsuda is an economically and medicinally important plant. Here, we report the first chloroplast (cp) genome of the genus Sida (S. szechuensis). The complete cp genome is 159,878 bp in length with an overall GC content of 36.9% and consists of a large single copy region (LSC, 89,42...

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Autores principales: Guo, Dong-Qin, Li, Hai-Ling, Liu, Chang, Zhang, Hua, Du, Hui-Hui, Zhou, Nong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567882/
https://www.ncbi.nlm.nih.gov/pubmed/34746387
http://dx.doi.org/10.1080/23802359.2021.1987161
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author Guo, Dong-Qin
Li, Hai-Ling
Liu, Chang
Zhang, Hua
Du, Hui-Hui
Zhou, Nong
author_facet Guo, Dong-Qin
Li, Hai-Ling
Liu, Chang
Zhang, Hua
Du, Hui-Hui
Zhou, Nong
author_sort Guo, Dong-Qin
collection PubMed
description Sida szechuensis Matsuda is an economically and medicinally important plant. Here, we report the first chloroplast (cp) genome of the genus Sida (S. szechuensis). The complete cp genome is 159,878 bp in length with an overall GC content of 36.9% and consists of a large single copy region (LSC, 89,426 bp), a small single copy region (SSC, 114,715 bp), and a pair of inverted repeat regions (IRa and IRb, 25,288 bp). The genome encodes 111 unique genes, including 78 protein-coding genes, 29 tRNA genes, 4 rRNA genes, and 1 pseudogene. Phylogenetic analysis constructed using the maximum likelihood (ML) method showed that Sida was closely related to Malvastrum and Malva.
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spelling pubmed-85678822021-11-05 The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae) Guo, Dong-Qin Li, Hai-Ling Liu, Chang Zhang, Hua Du, Hui-Hui Zhou, Nong Mitochondrial DNA B Resour Mitogenome Announcement Sida szechuensis Matsuda is an economically and medicinally important plant. Here, we report the first chloroplast (cp) genome of the genus Sida (S. szechuensis). The complete cp genome is 159,878 bp in length with an overall GC content of 36.9% and consists of a large single copy region (LSC, 89,426 bp), a small single copy region (SSC, 114,715 bp), and a pair of inverted repeat regions (IRa and IRb, 25,288 bp). The genome encodes 111 unique genes, including 78 protein-coding genes, 29 tRNA genes, 4 rRNA genes, and 1 pseudogene. Phylogenetic analysis constructed using the maximum likelihood (ML) method showed that Sida was closely related to Malvastrum and Malva. Taylor & Francis 2021-10-07 /pmc/articles/PMC8567882/ /pubmed/34746387 http://dx.doi.org/10.1080/23802359.2021.1987161 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Guo, Dong-Qin
Li, Hai-Ling
Liu, Chang
Zhang, Hua
Du, Hui-Hui
Zhou, Nong
The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae)
title The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae)
title_full The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae)
title_fullStr The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae)
title_full_unstemmed The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae)
title_short The complete chloroplast genome and phylogenetic analysis of Sida szechuensis matsuda (Malvaceae)
title_sort complete chloroplast genome and phylogenetic analysis of sida szechuensis matsuda (malvaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567882/
https://www.ncbi.nlm.nih.gov/pubmed/34746387
http://dx.doi.org/10.1080/23802359.2021.1987161
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