Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant

Tabernaemontana divaricate is a vulnerable species of Apocynaceae with significant medicinal values. In this study, the complete chloroplast (cp) genome of T. divaricate was determined through the Illumina NovaSeq platform. The circular molecular genome was157,954 bp in length with two inverted repe...

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Detalles Bibliográficos
Autores principales: Zhang, Kun, Liu, Limin, Shan, Xiaofei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567903/
https://www.ncbi.nlm.nih.gov/pubmed/34746383
http://dx.doi.org/10.1080/23802359.2021.1984331
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author Zhang, Kun
Liu, Limin
Shan, Xiaofei
author_facet Zhang, Kun
Liu, Limin
Shan, Xiaofei
author_sort Zhang, Kun
collection PubMed
description Tabernaemontana divaricate is a vulnerable species of Apocynaceae with significant medicinal values. In this study, the complete chloroplast (cp) genome of T. divaricate was determined through the Illumina NovaSeq platform. The circular molecular genome was157,954 bp in length with two inverted repeats (IRa and IRb) regions of 25,769 bp, a large single-copy (LSC) region of 88,246 bp, and a small single-copy (SSC) region of 18,170 bp. It contained 131 genes, including 86 protein-coding, 37 tRNA, and eight rRNA genes. Phylogenetic analysis showed that T. divaricata exhibited the closest relationship with Catharanthus roseus and Rauvolfia serpentina.
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spelling pubmed-85679032021-11-05 Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant Zhang, Kun Liu, Limin Shan, Xiaofei Mitochondrial DNA B Resour Mitogenome Announcement Tabernaemontana divaricate is a vulnerable species of Apocynaceae with significant medicinal values. In this study, the complete chloroplast (cp) genome of T. divaricate was determined through the Illumina NovaSeq platform. The circular molecular genome was157,954 bp in length with two inverted repeats (IRa and IRb) regions of 25,769 bp, a large single-copy (LSC) region of 88,246 bp, and a small single-copy (SSC) region of 18,170 bp. It contained 131 genes, including 86 protein-coding, 37 tRNA, and eight rRNA genes. Phylogenetic analysis showed that T. divaricata exhibited the closest relationship with Catharanthus roseus and Rauvolfia serpentina. Taylor & Francis 2021-11-03 /pmc/articles/PMC8567903/ /pubmed/34746383 http://dx.doi.org/10.1080/23802359.2021.1984331 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Kun
Liu, Limin
Shan, Xiaofei
Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant
title Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant
title_full Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant
title_fullStr Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant
title_full_unstemmed Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant
title_short Characterization of the complete chloroplast genome of Tabernaemontana divaricate (Apocynaceae), a valuable and endangered plant
title_sort characterization of the complete chloroplast genome of tabernaemontana divaricate (apocynaceae), a valuable and endangered plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567903/
https://www.ncbi.nlm.nih.gov/pubmed/34746383
http://dx.doi.org/10.1080/23802359.2021.1984331
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AT shanxiaofei characterizationofthecompletechloroplastgenomeoftabernaemontanadivaricateapocynaceaeavaluableandendangeredplant

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