The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae)

Styrax serrulatus Roxburgh (William Roxburgh 1832), which plays an important role in ecology and economy, is a deciduous species of Styracaceae. In this paper, we sequenced, assembled, and annotated the chloroplast (cp) genome of S. serrulatus by using the sequencing data from Illumina Novaseq platf...

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Autores principales: Tian, Lu, Xu, Xiaogang, Tong, Lili, Xia, Chongli, Cheng, Yao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567904/
https://www.ncbi.nlm.nih.gov/pubmed/34746391
http://dx.doi.org/10.1080/23802359.2021.1987170
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author Tian, Lu
Xu, Xiaogang
Tong, Lili
Xia, Chongli
Cheng, Yao
author_facet Tian, Lu
Xu, Xiaogang
Tong, Lili
Xia, Chongli
Cheng, Yao
author_sort Tian, Lu
collection PubMed
description Styrax serrulatus Roxburgh (William Roxburgh 1832), which plays an important role in ecology and economy, is a deciduous species of Styracaceae. In this paper, we sequenced, assembled, and annotated the chloroplast (cp) genome of S. serrulatus by using the sequencing data from Illumina Novaseq platform (Illumina, San Diego, CA). The complete cp genome of S. serrulatus is 157,929 base pairs (bp) in length, containing a pair of inverted repeat regions (IRs) of 26,048 bp each, a large single-copy (LSC) region of 87,552 bp, and a small single-copy (SSC) region of 18,281 bp. It contains 133 genes, including 8 rRNA genes, 37 tRNA genes, 87 protein-coding genes, and 1 pseudo gene. The GC content of S. serrulatus cp genome is 36.96%. The phylogenetic analysis suggests that S. serrulatus is a sister species to Styrax agrestis in Styracaceae.
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spelling pubmed-85679042021-11-05 The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae) Tian, Lu Xu, Xiaogang Tong, Lili Xia, Chongli Cheng, Yao Mitochondrial DNA B Resour Mitogenome Announcement Styrax serrulatus Roxburgh (William Roxburgh 1832), which plays an important role in ecology and economy, is a deciduous species of Styracaceae. In this paper, we sequenced, assembled, and annotated the chloroplast (cp) genome of S. serrulatus by using the sequencing data from Illumina Novaseq platform (Illumina, San Diego, CA). The complete cp genome of S. serrulatus is 157,929 base pairs (bp) in length, containing a pair of inverted repeat regions (IRs) of 26,048 bp each, a large single-copy (LSC) region of 87,552 bp, and a small single-copy (SSC) region of 18,281 bp. It contains 133 genes, including 8 rRNA genes, 37 tRNA genes, 87 protein-coding genes, and 1 pseudo gene. The GC content of S. serrulatus cp genome is 36.96%. The phylogenetic analysis suggests that S. serrulatus is a sister species to Styrax agrestis in Styracaceae. Taylor & Francis 2021-10-07 /pmc/articles/PMC8567904/ /pubmed/34746391 http://dx.doi.org/10.1080/23802359.2021.1987170 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tian, Lu
Xu, Xiaogang
Tong, Lili
Xia, Chongli
Cheng, Yao
The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae)
title The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae)
title_full The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae)
title_fullStr The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae)
title_full_unstemmed The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae)
title_short The complete chloroplast genome sequence of Styrax serrulatus Roxburgh (Styracaceae)
title_sort complete chloroplast genome sequence of styrax serrulatus roxburgh (styracaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567904/
https://www.ncbi.nlm.nih.gov/pubmed/34746391
http://dx.doi.org/10.1080/23802359.2021.1987170
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