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The complete mitochondrial genome of Dictyostelium intermedium
Dictyostelium intermedium is a member of dictyostelids, the unicellular eukaryotes with a unique life cycle, including a social cycle. Despite the high diversity of dictyostelids, only five species' complete mitochondrial genome sequences were reported. This study aimed to add the D. intermediu...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567905/ https://www.ncbi.nlm.nih.gov/pubmed/34746396 http://dx.doi.org/10.1080/23802359.2021.1989332 |
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author | Prommarit, Kamonchat Wonnapinij, Passorn |
author_facet | Prommarit, Kamonchat Wonnapinij, Passorn |
author_sort | Prommarit, Kamonchat |
collection | PubMed |
description | Dictyostelium intermedium is a member of dictyostelids, the unicellular eukaryotes with a unique life cycle, including a social cycle. Despite the high diversity of dictyostelids, only five species' complete mitochondrial genome sequences were reported. This study aimed to add the D. intermedium mitochondrial genome sequence to the list. The size of this genome is 58,627 bp, with 73.99% A/T, containing 62 genes located on one strand: 41 protein-coding genes, three ribosomal RNA genes, and 18 transfer RNA genes. The 41 protein-coding genes comprised 18 oxidative phosphorylation-related, 16 ribosomal, and seven hypothetical protein-coding genes. The cox1/2 and rnl gene contained introns, similar to other species of Dictyostelium. The phylogenetic tree built based on 34 protein sequences supported the monophyletic clade of Dictyostelium and the dictyostelids' ancestor's position between the two dictyostelids orders: Dictyosteliales and Acytosteliales. |
format | Online Article Text |
id | pubmed-8567905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-85679052021-11-05 The complete mitochondrial genome of Dictyostelium intermedium Prommarit, Kamonchat Wonnapinij, Passorn Mitochondrial DNA B Resour Mitogenome Announcement Dictyostelium intermedium is a member of dictyostelids, the unicellular eukaryotes with a unique life cycle, including a social cycle. Despite the high diversity of dictyostelids, only five species' complete mitochondrial genome sequences were reported. This study aimed to add the D. intermedium mitochondrial genome sequence to the list. The size of this genome is 58,627 bp, with 73.99% A/T, containing 62 genes located on one strand: 41 protein-coding genes, three ribosomal RNA genes, and 18 transfer RNA genes. The 41 protein-coding genes comprised 18 oxidative phosphorylation-related, 16 ribosomal, and seven hypothetical protein-coding genes. The cox1/2 and rnl gene contained introns, similar to other species of Dictyostelium. The phylogenetic tree built based on 34 protein sequences supported the monophyletic clade of Dictyostelium and the dictyostelids' ancestor's position between the two dictyostelids orders: Dictyosteliales and Acytosteliales. Taylor & Francis 2021-10-08 /pmc/articles/PMC8567905/ /pubmed/34746396 http://dx.doi.org/10.1080/23802359.2021.1989332 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Prommarit, Kamonchat Wonnapinij, Passorn The complete mitochondrial genome of Dictyostelium intermedium |
title | The complete mitochondrial genome of Dictyostelium intermedium |
title_full | The complete mitochondrial genome of Dictyostelium intermedium |
title_fullStr | The complete mitochondrial genome of Dictyostelium intermedium |
title_full_unstemmed | The complete mitochondrial genome of Dictyostelium intermedium |
title_short | The complete mitochondrial genome of Dictyostelium intermedium |
title_sort | complete mitochondrial genome of dictyostelium intermedium |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567905/ https://www.ncbi.nlm.nih.gov/pubmed/34746396 http://dx.doi.org/10.1080/23802359.2021.1989332 |
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