Cargando…
The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae)
The file ramshorn snail Planorbella pilsbryi Baker, 1926 (Gastropoda: Hygrophila: Planorbidae) is a widespread herbivorous North American freshwater snail found in diverse habitats, including standing and moving water bodies. Genome skimming by Illumina sequencing allowed the assembly of a complete...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567931/ https://www.ncbi.nlm.nih.gov/pubmed/34746397 http://dx.doi.org/10.1080/23802359.2021.1975508 |
_version_ | 1784594326774349824 |
---|---|
author | Rempel, Emma M. Marcus, Jeffrey M. Detwiler, Jillian T. |
author_facet | Rempel, Emma M. Marcus, Jeffrey M. Detwiler, Jillian T. |
author_sort | Rempel, Emma M. |
collection | PubMed |
description | The file ramshorn snail Planorbella pilsbryi Baker, 1926 (Gastropoda: Hygrophila: Planorbidae) is a widespread herbivorous North American freshwater snail found in diverse habitats, including standing and moving water bodies. Genome skimming by Illumina sequencing allowed the assembly of a complete nuclear rRNA repeat sequence and a complete circular mitogenome of 13,720 bp from P. pilsbryi consisting of 75.3% AT nucleotides, 22 tRNAs, 13 protein-coding genes, 2 rRNAs and a control region in the typical order found in panpulmonate snails. Planorbella pilsbryi COXI features a rare TTG start codon while COXII, CYTB, ND2, ND3, and ND5 exhibit incomplete stop codons completed by the addition of 3′ A residues to the mRNA. Phylogenetic reconstruction of mitochondrial protein-coding gene and rRNA sequences places P. pilsbryi as sister taxon to Planorbella duryi (Planorbidae) within family Planorbidae, which is consistent with previous phylogenetic hypotheses. |
format | Online Article Text |
id | pubmed-8567931 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-85679312021-11-05 The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae) Rempel, Emma M. Marcus, Jeffrey M. Detwiler, Jillian T. Mitochondrial DNA B Resour Mitogenome Announcement The file ramshorn snail Planorbella pilsbryi Baker, 1926 (Gastropoda: Hygrophila: Planorbidae) is a widespread herbivorous North American freshwater snail found in diverse habitats, including standing and moving water bodies. Genome skimming by Illumina sequencing allowed the assembly of a complete nuclear rRNA repeat sequence and a complete circular mitogenome of 13,720 bp from P. pilsbryi consisting of 75.3% AT nucleotides, 22 tRNAs, 13 protein-coding genes, 2 rRNAs and a control region in the typical order found in panpulmonate snails. Planorbella pilsbryi COXI features a rare TTG start codon while COXII, CYTB, ND2, ND3, and ND5 exhibit incomplete stop codons completed by the addition of 3′ A residues to the mRNA. Phylogenetic reconstruction of mitochondrial protein-coding gene and rRNA sequences places P. pilsbryi as sister taxon to Planorbella duryi (Planorbidae) within family Planorbidae, which is consistent with previous phylogenetic hypotheses. Taylor & Francis 2021-10-11 /pmc/articles/PMC8567931/ /pubmed/34746397 http://dx.doi.org/10.1080/23802359.2021.1975508 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Rempel, Emma M. Marcus, Jeffrey M. Detwiler, Jillian T. The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae) |
title | The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae) |
title_full | The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae) |
title_fullStr | The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae) |
title_full_unstemmed | The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae) |
title_short | The complete mitochondrial genome of the file ramshorn snail Planorbella pilsbryi (Mollusca: Gastropoda: Hygrophila: Planorbidae) |
title_sort | complete mitochondrial genome of the file ramshorn snail planorbella pilsbryi (mollusca: gastropoda: hygrophila: planorbidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567931/ https://www.ncbi.nlm.nih.gov/pubmed/34746397 http://dx.doi.org/10.1080/23802359.2021.1975508 |
work_keys_str_mv | AT rempelemmam thecompletemitochondrialgenomeofthefileramshornsnailplanorbellapilsbryimolluscagastropodahygrophilaplanorbidae AT marcusjeffreym thecompletemitochondrialgenomeofthefileramshornsnailplanorbellapilsbryimolluscagastropodahygrophilaplanorbidae AT detwilerjilliant thecompletemitochondrialgenomeofthefileramshornsnailplanorbellapilsbryimolluscagastropodahygrophilaplanorbidae AT rempelemmam completemitochondrialgenomeofthefileramshornsnailplanorbellapilsbryimolluscagastropodahygrophilaplanorbidae AT marcusjeffreym completemitochondrialgenomeofthefileramshornsnailplanorbellapilsbryimolluscagastropodahygrophilaplanorbidae AT detwilerjilliant completemitochondrialgenomeofthefileramshornsnailplanorbellapilsbryimolluscagastropodahygrophilaplanorbidae |