The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales

Zelkova sinica is a popular landscape plant in China because of its wide adaptation, strong disease resistance, large crown and beautiful fall color. Here, we assembled the complete chloroplast (cp) genome of Z. sinica based on genome skimming data. The cp genome is 158,924 bp in length including tw...

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Detalles Bibliográficos
Autores principales: Liu, Xinyi, Li, Rui, Wang, Shuyun, Liu, Luxian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567943/
https://www.ncbi.nlm.nih.gov/pubmed/34746390
http://dx.doi.org/10.1080/23802359.2021.1987168
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author Liu, Xinyi
Li, Rui
Wang, Shuyun
Liu, Luxian
author_facet Liu, Xinyi
Li, Rui
Wang, Shuyun
Liu, Luxian
author_sort Liu, Xinyi
collection PubMed
description Zelkova sinica is a popular landscape plant in China because of its wide adaptation, strong disease resistance, large crown and beautiful fall color. Here, we assembled the complete chloroplast (cp) genome of Z. sinica based on genome skimming data. The cp genome is 158,924 bp in length including two copies of inverted region (IR, 26,427 bp) separated by the large single copy (LSC, 87,318 bp) and small single copy (SSC, 18,752 bp) regions. It encodes 111 unique genes, containing 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes, with 18 duplicated genes in the IR regions. Phylogenetic analysis shows that Z. sinica is sister to Z. schneideriana in Ulmaceae family.
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spelling pubmed-85679432021-11-05 The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales Liu, Xinyi Li, Rui Wang, Shuyun Liu, Luxian Mitochondrial DNA B Resour Mitogenome Announcement Zelkova sinica is a popular landscape plant in China because of its wide adaptation, strong disease resistance, large crown and beautiful fall color. Here, we assembled the complete chloroplast (cp) genome of Z. sinica based on genome skimming data. The cp genome is 158,924 bp in length including two copies of inverted region (IR, 26,427 bp) separated by the large single copy (LSC, 87,318 bp) and small single copy (SSC, 18,752 bp) regions. It encodes 111 unique genes, containing 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes, with 18 duplicated genes in the IR regions. Phylogenetic analysis shows that Z. sinica is sister to Z. schneideriana in Ulmaceae family. Taylor & Francis 2021-10-07 /pmc/articles/PMC8567943/ /pubmed/34746390 http://dx.doi.org/10.1080/23802359.2021.1987168 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Xinyi
Li, Rui
Wang, Shuyun
Liu, Luxian
The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales
title The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales
title_full The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales
title_fullStr The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales
title_full_unstemmed The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales
title_short The complete chloroplast genome sequence of Zelkova sinica and phylogenetic implications in Rosales
title_sort complete chloroplast genome sequence of zelkova sinica and phylogenetic implications in rosales
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567943/
https://www.ncbi.nlm.nih.gov/pubmed/34746390
http://dx.doi.org/10.1080/23802359.2021.1987168
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