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Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae)
Ammopiptanthus mongolicus is the only evergreen broadleaf shrub in the northwest desert of China, which can survive in long-term aridity and extremely cold environments. In this study, the complete chloroplast genome sequence of A. mongolicus was reported based on the Illumina NovaSeq Platform (Illu...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567949/ https://www.ncbi.nlm.nih.gov/pubmed/34746393 http://dx.doi.org/10.1080/23802359.2021.1987174 |
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author | Hu, Jing Peiying, Yan Chang, Li Zhang, Huiwen |
author_facet | Hu, Jing Peiying, Yan Chang, Li Zhang, Huiwen |
author_sort | Hu, Jing |
collection | PubMed |
description | Ammopiptanthus mongolicus is the only evergreen broadleaf shrub in the northwest desert of China, which can survive in long-term aridity and extremely cold environments. In this study, the complete chloroplast genome sequence of A. mongolicus was reported based on the Illumina NovaSeq Platform (Illumina, San Diego, CA). The chloroplast genome is 156,077 bp in length, containing a pair of inverted repeated (IR) regions (14,698 bp) that are separated by a large single copy (LSC) region of 88,025 bp, and a small single copy (SSC) region of 36,606 bp. Moreover, a total of 115 functional genes were annotated, including 81 mRNA, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on 16 chloroplast genomics indicates that A. mongolicus is closely related to A. nanus. |
format | Online Article Text |
id | pubmed-8567949 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-85679492021-11-05 Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae) Hu, Jing Peiying, Yan Chang, Li Zhang, Huiwen Mitochondrial DNA B Resour Mitogenome Announcement Ammopiptanthus mongolicus is the only evergreen broadleaf shrub in the northwest desert of China, which can survive in long-term aridity and extremely cold environments. In this study, the complete chloroplast genome sequence of A. mongolicus was reported based on the Illumina NovaSeq Platform (Illumina, San Diego, CA). The chloroplast genome is 156,077 bp in length, containing a pair of inverted repeated (IR) regions (14,698 bp) that are separated by a large single copy (LSC) region of 88,025 bp, and a small single copy (SSC) region of 36,606 bp. Moreover, a total of 115 functional genes were annotated, including 81 mRNA, 30 tRNA genes, and 4 rRNA genes. Phylogenetic analysis based on 16 chloroplast genomics indicates that A. mongolicus is closely related to A. nanus. Taylor & Francis 2021-10-07 /pmc/articles/PMC8567949/ /pubmed/34746393 http://dx.doi.org/10.1080/23802359.2021.1987174 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Hu, Jing Peiying, Yan Chang, Li Zhang, Huiwen Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae) |
title | Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae) |
title_full | Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae) |
title_fullStr | Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae) |
title_full_unstemmed | Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae) |
title_short | Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae) |
title_sort | characterization of the complete chloroplast genome of ammopiptanthus mongolicus (leguminosae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8567949/ https://www.ncbi.nlm.nih.gov/pubmed/34746393 http://dx.doi.org/10.1080/23802359.2021.1987174 |
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