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Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma
Ferroptosis plays a critical role in different types of cancers, but the prognostic impact of ferroptosis in cutaneous melanoma remains lacking. Therefore, ferroptosis-related genes (FRGs) were firstly obtained from the FerrDb database and the differentially expressed FRGs were identified by the “li...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8568558/ https://www.ncbi.nlm.nih.gov/pubmed/34745259 http://dx.doi.org/10.1155/2021/3658196 |
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author | Zeng, Hao You, Cong Zhao, Leran Wang, Jiangyi Ye, Xiaoying Yang, Tao Wan, Chunlei Deng, Longying |
author_facet | Zeng, Hao You, Cong Zhao, Leran Wang, Jiangyi Ye, Xiaoying Yang, Tao Wan, Chunlei Deng, Longying |
author_sort | Zeng, Hao |
collection | PubMed |
description | Ferroptosis plays a critical role in different types of cancers, but the prognostic impact of ferroptosis in cutaneous melanoma remains lacking. Therefore, ferroptosis-related genes (FRGs) were firstly obtained from the FerrDb database and the differentially expressed FRGs were identified by the “limma” algorithm. Next, the prognostic differentially expressed FRGs were screened out by univariate Cox regression, which were subsequently used to cluster melanomas into two subtypes (clusters A and B). Besides, the Boruta algorithm and principal component analysis (PCA) were performed to build a 15-FRGs indicator, which can robustly predict patients' overall survival (OS) and be considered as an independent prognostic factor in melanoma. The melanoma patients were further divided into high- and low-FRGs score groups. The high score group have a good prognosis, with higher T cell immune infiltrating and lower mutation frequencies in NRAS, KRAS, and NF1. Finally, we discovered that many immune processes and several chemotherapy drugs were closely associated with FRGs score. Thus, our study provides a novel ferroptosis-associated classifier and indicator to predict the prognosis of melanoma. Besides, we identified several potential chemotherapy drugs to induce ferroptosis and could supply additional effective treatments. |
format | Online Article Text |
id | pubmed-8568558 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-85685582021-11-05 Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma Zeng, Hao You, Cong Zhao, Leran Wang, Jiangyi Ye, Xiaoying Yang, Tao Wan, Chunlei Deng, Longying J Oncol Review Article Ferroptosis plays a critical role in different types of cancers, but the prognostic impact of ferroptosis in cutaneous melanoma remains lacking. Therefore, ferroptosis-related genes (FRGs) were firstly obtained from the FerrDb database and the differentially expressed FRGs were identified by the “limma” algorithm. Next, the prognostic differentially expressed FRGs were screened out by univariate Cox regression, which were subsequently used to cluster melanomas into two subtypes (clusters A and B). Besides, the Boruta algorithm and principal component analysis (PCA) were performed to build a 15-FRGs indicator, which can robustly predict patients' overall survival (OS) and be considered as an independent prognostic factor in melanoma. The melanoma patients were further divided into high- and low-FRGs score groups. The high score group have a good prognosis, with higher T cell immune infiltrating and lower mutation frequencies in NRAS, KRAS, and NF1. Finally, we discovered that many immune processes and several chemotherapy drugs were closely associated with FRGs score. Thus, our study provides a novel ferroptosis-associated classifier and indicator to predict the prognosis of melanoma. Besides, we identified several potential chemotherapy drugs to induce ferroptosis and could supply additional effective treatments. Hindawi 2021-10-28 /pmc/articles/PMC8568558/ /pubmed/34745259 http://dx.doi.org/10.1155/2021/3658196 Text en Copyright © 2021 Hao Zeng et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Review Article Zeng, Hao You, Cong Zhao, Leran Wang, Jiangyi Ye, Xiaoying Yang, Tao Wan, Chunlei Deng, Longying Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma |
title | Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma |
title_full | Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma |
title_fullStr | Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma |
title_full_unstemmed | Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma |
title_short | Ferroptosis-Associated Classifier and Indicator for Prognostic Prediction in Cutaneous Melanoma |
title_sort | ferroptosis-associated classifier and indicator for prognostic prediction in cutaneous melanoma |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8568558/ https://www.ncbi.nlm.nih.gov/pubmed/34745259 http://dx.doi.org/10.1155/2021/3658196 |
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