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Features and applications of haplotypes in crop breeding
Climate change with altered pest-disease dynamics and rising abiotic stresses threatens resource-constrained agricultural production systems worldwide. Genomics-assisted breeding (GAB) approaches have greatly contributed to enhancing crop breeding efficiency and delivering better varieties. Fast-gro...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8568931/ https://www.ncbi.nlm.nih.gov/pubmed/34737387 http://dx.doi.org/10.1038/s42003-021-02782-y |
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author | Bhat, Javaid Akhter Yu, Deyue Bohra, Abhishek Ganie, Showkat Ahmad Varshney, Rajeev K. |
author_facet | Bhat, Javaid Akhter Yu, Deyue Bohra, Abhishek Ganie, Showkat Ahmad Varshney, Rajeev K. |
author_sort | Bhat, Javaid Akhter |
collection | PubMed |
description | Climate change with altered pest-disease dynamics and rising abiotic stresses threatens resource-constrained agricultural production systems worldwide. Genomics-assisted breeding (GAB) approaches have greatly contributed to enhancing crop breeding efficiency and delivering better varieties. Fast-growing capacity and affordability of DNA sequencing has motivated large-scale germplasm sequencing projects, thus opening exciting avenues for mining haplotypes for breeding applications. This review article highlights ways to mine haplotypes and apply them for complex trait dissection and in GAB approaches including haplotype-GWAS, haplotype-based breeding, haplotype-assisted genomic selection. Improvement strategies that efficiently deploy superior haplotypes to hasten breeding progress will be key to safeguarding global food security. |
format | Online Article Text |
id | pubmed-8568931 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-85689312021-11-15 Features and applications of haplotypes in crop breeding Bhat, Javaid Akhter Yu, Deyue Bohra, Abhishek Ganie, Showkat Ahmad Varshney, Rajeev K. Commun Biol Review Article Climate change with altered pest-disease dynamics and rising abiotic stresses threatens resource-constrained agricultural production systems worldwide. Genomics-assisted breeding (GAB) approaches have greatly contributed to enhancing crop breeding efficiency and delivering better varieties. Fast-growing capacity and affordability of DNA sequencing has motivated large-scale germplasm sequencing projects, thus opening exciting avenues for mining haplotypes for breeding applications. This review article highlights ways to mine haplotypes and apply them for complex trait dissection and in GAB approaches including haplotype-GWAS, haplotype-based breeding, haplotype-assisted genomic selection. Improvement strategies that efficiently deploy superior haplotypes to hasten breeding progress will be key to safeguarding global food security. Nature Publishing Group UK 2021-11-04 /pmc/articles/PMC8568931/ /pubmed/34737387 http://dx.doi.org/10.1038/s42003-021-02782-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Review Article Bhat, Javaid Akhter Yu, Deyue Bohra, Abhishek Ganie, Showkat Ahmad Varshney, Rajeev K. Features and applications of haplotypes in crop breeding |
title | Features and applications of haplotypes in crop breeding |
title_full | Features and applications of haplotypes in crop breeding |
title_fullStr | Features and applications of haplotypes in crop breeding |
title_full_unstemmed | Features and applications of haplotypes in crop breeding |
title_short | Features and applications of haplotypes in crop breeding |
title_sort | features and applications of haplotypes in crop breeding |
topic | Review Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8568931/ https://www.ncbi.nlm.nih.gov/pubmed/34737387 http://dx.doi.org/10.1038/s42003-021-02782-y |
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