Cargando…

Aerial high-throughput phenotyping of peanut leaf area index and lateral growth

Leaf area index (LAI) is the ratio of the total one-sided leaf area to the ground area, whereas lateral growth (LG) is the measure of canopy expansion. They are indicators for light capture, plant growth, and yield. Although LAI and LG can be directly measured, this is time consuming. Healthy leaves...

Descripción completa

Detalles Bibliográficos
Autores principales: Sarkar, Sayantan, Cazenave, Alexandre-Brice, Oakes, Joseph, McCall, David, Thomason, Wade, Abbott, Lynn, Balota, Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8569151/
https://www.ncbi.nlm.nih.gov/pubmed/34737338
http://dx.doi.org/10.1038/s41598-021-00936-w
_version_ 1784594590194466816
author Sarkar, Sayantan
Cazenave, Alexandre-Brice
Oakes, Joseph
McCall, David
Thomason, Wade
Abbott, Lynn
Balota, Maria
author_facet Sarkar, Sayantan
Cazenave, Alexandre-Brice
Oakes, Joseph
McCall, David
Thomason, Wade
Abbott, Lynn
Balota, Maria
author_sort Sarkar, Sayantan
collection PubMed
description Leaf area index (LAI) is the ratio of the total one-sided leaf area to the ground area, whereas lateral growth (LG) is the measure of canopy expansion. They are indicators for light capture, plant growth, and yield. Although LAI and LG can be directly measured, this is time consuming. Healthy leaves absorb in the blue and red, and reflect in the green regions of the electromagnetic spectrum. Aerial high-throughput phenotyping (HTP) may enable rapid acquisition of LAI and LG from leaf reflectance in these regions. In this paper, we report novel models to estimate peanut (Arachis hypogaea L.) LAI and LG from vegetation indices (VIs) derived relatively fast and inexpensively from the red, green, and blue (RGB) leaf reflectance collected with an unmanned aerial vehicle (UAV). In addition, we evaluate the models’ suitability to identify phenotypic variation for LAI and LG and predict pod yield from early season estimated LAI and LG. The study included 18 peanut genotypes for model training in 2017, and 8 genotypes for model validation in 2019. The VIs included the blue green index (BGI), red-green ratio (RGR), normalized plant pigment ratio (NPPR), normalized green red difference index (NGRDI), normalized chlorophyll pigment index (NCPI), and plant pigment ratio (PPR). The models used multiple linear and artificial neural network (ANN) regression, and their predictive accuracy ranged from 84 to 97%, depending on the VIs combinations used in the models. The results concluded that the new models were time- and cost-effective for estimation of LAI and LG, and accessible for use in phenotypic selection of peanuts with desirable LAI, LG and pod yield.
format Online
Article
Text
id pubmed-8569151
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-85691512021-11-05 Aerial high-throughput phenotyping of peanut leaf area index and lateral growth Sarkar, Sayantan Cazenave, Alexandre-Brice Oakes, Joseph McCall, David Thomason, Wade Abbott, Lynn Balota, Maria Sci Rep Article Leaf area index (LAI) is the ratio of the total one-sided leaf area to the ground area, whereas lateral growth (LG) is the measure of canopy expansion. They are indicators for light capture, plant growth, and yield. Although LAI and LG can be directly measured, this is time consuming. Healthy leaves absorb in the blue and red, and reflect in the green regions of the electromagnetic spectrum. Aerial high-throughput phenotyping (HTP) may enable rapid acquisition of LAI and LG from leaf reflectance in these regions. In this paper, we report novel models to estimate peanut (Arachis hypogaea L.) LAI and LG from vegetation indices (VIs) derived relatively fast and inexpensively from the red, green, and blue (RGB) leaf reflectance collected with an unmanned aerial vehicle (UAV). In addition, we evaluate the models’ suitability to identify phenotypic variation for LAI and LG and predict pod yield from early season estimated LAI and LG. The study included 18 peanut genotypes for model training in 2017, and 8 genotypes for model validation in 2019. The VIs included the blue green index (BGI), red-green ratio (RGR), normalized plant pigment ratio (NPPR), normalized green red difference index (NGRDI), normalized chlorophyll pigment index (NCPI), and plant pigment ratio (PPR). The models used multiple linear and artificial neural network (ANN) regression, and their predictive accuracy ranged from 84 to 97%, depending on the VIs combinations used in the models. The results concluded that the new models were time- and cost-effective for estimation of LAI and LG, and accessible for use in phenotypic selection of peanuts with desirable LAI, LG and pod yield. Nature Publishing Group UK 2021-11-04 /pmc/articles/PMC8569151/ /pubmed/34737338 http://dx.doi.org/10.1038/s41598-021-00936-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Sarkar, Sayantan
Cazenave, Alexandre-Brice
Oakes, Joseph
McCall, David
Thomason, Wade
Abbott, Lynn
Balota, Maria
Aerial high-throughput phenotyping of peanut leaf area index and lateral growth
title Aerial high-throughput phenotyping of peanut leaf area index and lateral growth
title_full Aerial high-throughput phenotyping of peanut leaf area index and lateral growth
title_fullStr Aerial high-throughput phenotyping of peanut leaf area index and lateral growth
title_full_unstemmed Aerial high-throughput phenotyping of peanut leaf area index and lateral growth
title_short Aerial high-throughput phenotyping of peanut leaf area index and lateral growth
title_sort aerial high-throughput phenotyping of peanut leaf area index and lateral growth
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8569151/
https://www.ncbi.nlm.nih.gov/pubmed/34737338
http://dx.doi.org/10.1038/s41598-021-00936-w
work_keys_str_mv AT sarkarsayantan aerialhighthroughputphenotypingofpeanutleafareaindexandlateralgrowth
AT cazenavealexandrebrice aerialhighthroughputphenotypingofpeanutleafareaindexandlateralgrowth
AT oakesjoseph aerialhighthroughputphenotypingofpeanutleafareaindexandlateralgrowth
AT mccalldavid aerialhighthroughputphenotypingofpeanutleafareaindexandlateralgrowth
AT thomasonwade aerialhighthroughputphenotypingofpeanutleafareaindexandlateralgrowth
AT abbottlynn aerialhighthroughputphenotypingofpeanutleafareaindexandlateralgrowth
AT balotamaria aerialhighthroughputphenotypingofpeanutleafareaindexandlateralgrowth