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The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma
BACKGROUND: Bone morphogenetic proteins (BMPs) regulate tumor progression via binding to their receptors (BMPRs). However, the expression and clinical significance of BMPs/BMPRs in lung adenocarcinoma remain unclear due to a lack of systematic studies. METHODS: This study screened differentially exp...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8569625/ https://www.ncbi.nlm.nih.gov/pubmed/34745928 http://dx.doi.org/10.3389/fonc.2021.608239 |
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author | Meng, Wangyang Xiao, Han Zhao, Rong Li, Dong Li, Kuo Meng, Yunchong Chen, Jiaping Wang, Yangwei Liao, Yongde |
author_facet | Meng, Wangyang Xiao, Han Zhao, Rong Li, Dong Li, Kuo Meng, Yunchong Chen, Jiaping Wang, Yangwei Liao, Yongde |
author_sort | Meng, Wangyang |
collection | PubMed |
description | BACKGROUND: Bone morphogenetic proteins (BMPs) regulate tumor progression via binding to their receptors (BMPRs). However, the expression and clinical significance of BMPs/BMPRs in lung adenocarcinoma remain unclear due to a lack of systematic studies. METHODS: This study screened differentially expressed BMPs/BMPRs (deBMPs/BMPRs) in a training dataset combining TCGA-LUAD and GTEx-LUNG and verified them in four GEO datasets. Their prognostic value was evaluated via univariate and multivariate Cox regression analyses. LASSO was performed to construct an initial risk model. Subsequently, after weighted gene co-expression network analysis (WGCNA), differential expression analysis, and univariate Cox regression analysis, hub genes co-expressed with differentially expressed BMPs/BMPRs were filtered out to improve the risk model and explore potential mechanisms. The improved risk model was re-established via LASSO combining hub genes with differentially expressed BMPs/BMPRs as the core. In the testing cohort including 93 lung adenocarcinoma patients, immunohistochemistry (IHC) was performed to verify BMP5 protein expression and its association with prognosis. RESULTS: BMP2, BMP5, BMP6, GDF10, and ACVRL1 were verified as downregulated in lung adenocarcinoma. Survival analysis identified BMP5 as an independent protective prognostic factor. We also found that BMP5 was significantly correlated with EGFR expression and mutations, suggesting that BMP5 may play a role in targeted therapy. The initial risk model containing only BMP5 showed a significant correlation (HR: 1.71, 95% CI: 1.28−2.28, p: 3e-04) but low prognostic accuracy (AUC of 1-year survival: 0.6, 3-year survival: 0.6, 5-year survival: 0.63). Seventy-nine hub genes co-expressed with BMP5 were identified, and their functions were enriched in cell migration and tumor metastasis. The re-established risk model showed greater prognostic correlation (HR: 2.58, 95% CI: 1.92–3.46, p: 0) and value (AUC of 1-year survival: 0.72, 3-year survival: 0.69, and 5-year survival: 0.68). IHC results revealed that BMP5 protein was also downregulated in lung adenocarcinoma and higher expression was markedly associated with better prognosis (HR: 0.44, 95% CI: 0.23–0.85, p: 0.0145). CONCLUSION: BMP5 is a potential crucial target for lung adenocarcinoma treatment based on significant differential expression and superior prognostic value. |
format | Online Article Text |
id | pubmed-8569625 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85696252021-11-06 The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma Meng, Wangyang Xiao, Han Zhao, Rong Li, Dong Li, Kuo Meng, Yunchong Chen, Jiaping Wang, Yangwei Liao, Yongde Front Oncol Oncology BACKGROUND: Bone morphogenetic proteins (BMPs) regulate tumor progression via binding to their receptors (BMPRs). However, the expression and clinical significance of BMPs/BMPRs in lung adenocarcinoma remain unclear due to a lack of systematic studies. METHODS: This study screened differentially expressed BMPs/BMPRs (deBMPs/BMPRs) in a training dataset combining TCGA-LUAD and GTEx-LUNG and verified them in four GEO datasets. Their prognostic value was evaluated via univariate and multivariate Cox regression analyses. LASSO was performed to construct an initial risk model. Subsequently, after weighted gene co-expression network analysis (WGCNA), differential expression analysis, and univariate Cox regression analysis, hub genes co-expressed with differentially expressed BMPs/BMPRs were filtered out to improve the risk model and explore potential mechanisms. The improved risk model was re-established via LASSO combining hub genes with differentially expressed BMPs/BMPRs as the core. In the testing cohort including 93 lung adenocarcinoma patients, immunohistochemistry (IHC) was performed to verify BMP5 protein expression and its association with prognosis. RESULTS: BMP2, BMP5, BMP6, GDF10, and ACVRL1 were verified as downregulated in lung adenocarcinoma. Survival analysis identified BMP5 as an independent protective prognostic factor. We also found that BMP5 was significantly correlated with EGFR expression and mutations, suggesting that BMP5 may play a role in targeted therapy. The initial risk model containing only BMP5 showed a significant correlation (HR: 1.71, 95% CI: 1.28−2.28, p: 3e-04) but low prognostic accuracy (AUC of 1-year survival: 0.6, 3-year survival: 0.6, 5-year survival: 0.63). Seventy-nine hub genes co-expressed with BMP5 were identified, and their functions were enriched in cell migration and tumor metastasis. The re-established risk model showed greater prognostic correlation (HR: 2.58, 95% CI: 1.92–3.46, p: 0) and value (AUC of 1-year survival: 0.72, 3-year survival: 0.69, and 5-year survival: 0.68). IHC results revealed that BMP5 protein was also downregulated in lung adenocarcinoma and higher expression was markedly associated with better prognosis (HR: 0.44, 95% CI: 0.23–0.85, p: 0.0145). CONCLUSION: BMP5 is a potential crucial target for lung adenocarcinoma treatment based on significant differential expression and superior prognostic value. Frontiers Media S.A. 2021-10-22 /pmc/articles/PMC8569625/ /pubmed/34745928 http://dx.doi.org/10.3389/fonc.2021.608239 Text en Copyright © 2021 Meng, Xiao, Zhao, Li, Li, Meng, Chen, Wang and Liao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Meng, Wangyang Xiao, Han Zhao, Rong Li, Dong Li, Kuo Meng, Yunchong Chen, Jiaping Wang, Yangwei Liao, Yongde The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma |
title | The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma |
title_full | The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma |
title_fullStr | The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma |
title_full_unstemmed | The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma |
title_short | The Prognostic Value of Bone Morphogenetic Proteins and Their Receptors in Lung Adenocarcinoma |
title_sort | prognostic value of bone morphogenetic proteins and their receptors in lung adenocarcinoma |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8569625/ https://www.ncbi.nlm.nih.gov/pubmed/34745928 http://dx.doi.org/10.3389/fonc.2021.608239 |
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