Cargando…
IntelliPy: a GUI for analyzing IntelliCage data
SUMMARY: The IntelliCage systems offer the possibility to conduct long-term behavioral experiments on mice in social groups without human intervention. Although this setup provides new findings, only about 150 studies with the IntelliCage system have been published in the last two decades, which is...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8570781/ https://www.ncbi.nlm.nih.gov/pubmed/34601559 http://dx.doi.org/10.1093/bioinformatics/btab682 |
_version_ | 1784594890746757120 |
---|---|
author | Ruffini, Nicolas Müller, Marianne B Schmitt, Ulrich Gerber, Susanne |
author_facet | Ruffini, Nicolas Müller, Marianne B Schmitt, Ulrich Gerber, Susanne |
author_sort | Ruffini, Nicolas |
collection | PubMed |
description | SUMMARY: The IntelliCage systems offer the possibility to conduct long-term behavioral experiments on mice in social groups without human intervention. Although this setup provides new findings, only about 150 studies with the IntelliCage system have been published in the last two decades, which is also caused by the challenging problems of processing and handling the large and heterogeneous amounts of captured data. This application note introduces the Python-GUI IntelliPy, especially designed for users not very experienced in using programming languages. IntelliPy allows users to quickly analyze the IntelliCage output in a user-friendly way, thus making the systems more accessible to a broader audience. AVAILABILITY AND IMPLEMENTATION: https://github.com/NiRuff/IntelliPy. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. |
format | Online Article Text |
id | pubmed-8570781 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-85707812021-11-08 IntelliPy: a GUI for analyzing IntelliCage data Ruffini, Nicolas Müller, Marianne B Schmitt, Ulrich Gerber, Susanne Bioinformatics Applications Notes SUMMARY: The IntelliCage systems offer the possibility to conduct long-term behavioral experiments on mice in social groups without human intervention. Although this setup provides new findings, only about 150 studies with the IntelliCage system have been published in the last two decades, which is also caused by the challenging problems of processing and handling the large and heterogeneous amounts of captured data. This application note introduces the Python-GUI IntelliPy, especially designed for users not very experienced in using programming languages. IntelliPy allows users to quickly analyze the IntelliCage output in a user-friendly way, thus making the systems more accessible to a broader audience. AVAILABILITY AND IMPLEMENTATION: https://github.com/NiRuff/IntelliPy. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online. Oxford University Press 2021-10-02 /pmc/articles/PMC8570781/ /pubmed/34601559 http://dx.doi.org/10.1093/bioinformatics/btab682 Text en © The Author(s) 2021. Published by Oxford University Press. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Applications Notes Ruffini, Nicolas Müller, Marianne B Schmitt, Ulrich Gerber, Susanne IntelliPy: a GUI for analyzing IntelliCage data |
title | IntelliPy: a GUI for analyzing IntelliCage data |
title_full | IntelliPy: a GUI for analyzing IntelliCage data |
title_fullStr | IntelliPy: a GUI for analyzing IntelliCage data |
title_full_unstemmed | IntelliPy: a GUI for analyzing IntelliCage data |
title_short | IntelliPy: a GUI for analyzing IntelliCage data |
title_sort | intellipy: a gui for analyzing intellicage data |
topic | Applications Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8570781/ https://www.ncbi.nlm.nih.gov/pubmed/34601559 http://dx.doi.org/10.1093/bioinformatics/btab682 |
work_keys_str_mv | AT ruffininicolas intellipyaguiforanalyzingintellicagedata AT mullermarianneb intellipyaguiforanalyzingintellicagedata AT schmittulrich intellipyaguiforanalyzingintellicagedata AT gerbersusanne intellipyaguiforanalyzingintellicagedata |