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An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19
The SARS-CoV-2 virus causes a respiratory disease in humans, known as COVID-19. The confirmatory diagnostic of this disease occurs through the real-time reverse transcription and polymerase chain reaction test (RT-qPCR). However, the period of obtaining the results limits the application of the mass...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer US
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8572648/ https://www.ncbi.nlm.nih.gov/pubmed/34777680 http://dx.doi.org/10.1007/s11265-021-01714-7 |
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author | Teodoro, Arthur A. M. Silva, Douglas H. Saadi, Muhammad Okey, Ogobuchi D. Rosa, Renata L. Otaibi, Sattam Al Rodríguez, Demóstenes Z. |
author_facet | Teodoro, Arthur A. M. Silva, Douglas H. Saadi, Muhammad Okey, Ogobuchi D. Rosa, Renata L. Otaibi, Sattam Al Rodríguez, Demóstenes Z. |
author_sort | Teodoro, Arthur A. M. |
collection | PubMed |
description | The SARS-CoV-2 virus causes a respiratory disease in humans, known as COVID-19. The confirmatory diagnostic of this disease occurs through the real-time reverse transcription and polymerase chain reaction test (RT-qPCR). However, the period of obtaining the results limits the application of the mass test. Thus, chest X-ray computed tomography (CT) images are analyzed to help diagnose the disease. However, during an outbreak of a disease that causes respiratory problems, radiologists may be overwhelmed with analyzing medical images. In the literature, some studies used feature extraction techniques based on CNNs, with classification models to identify COVID-19 and non-COVID-19. This work compare the performance of applying pre-trained CNNs in conjunction with classification methods based on machine learning algorithms. The main objective is to analyze the impact of the features extracted by CNNs, in the construction of models to classify COVID-19 and non-COVID-19. A SARS-CoV-2 CT data-set is used in experimental tests. The CNNs implemented are visual geometry group (VGG-16 and VGG-19), inception V3 (IV3), and EfficientNet-B0 (EB0). The classification methods were k-nearest neighbor (KNN), support vector machine (SVM), and explainable deep neural networks (xDNN). In the experiments, the best results were obtained by the EfficientNet model used to extract data and the SVM with an RBF kernel. This approach achieved an average performance of 0.9856 in the precision macro, 0.9853 in the sensitivity macro, 0.9853 in the specificity macro, and 0.9853 in the F1 score macro. |
format | Online Article Text |
id | pubmed-8572648 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-85726482021-11-08 An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19 Teodoro, Arthur A. M. Silva, Douglas H. Saadi, Muhammad Okey, Ogobuchi D. Rosa, Renata L. Otaibi, Sattam Al Rodríguez, Demóstenes Z. J Signal Process Syst Article The SARS-CoV-2 virus causes a respiratory disease in humans, known as COVID-19. The confirmatory diagnostic of this disease occurs through the real-time reverse transcription and polymerase chain reaction test (RT-qPCR). However, the period of obtaining the results limits the application of the mass test. Thus, chest X-ray computed tomography (CT) images are analyzed to help diagnose the disease. However, during an outbreak of a disease that causes respiratory problems, radiologists may be overwhelmed with analyzing medical images. In the literature, some studies used feature extraction techniques based on CNNs, with classification models to identify COVID-19 and non-COVID-19. This work compare the performance of applying pre-trained CNNs in conjunction with classification methods based on machine learning algorithms. The main objective is to analyze the impact of the features extracted by CNNs, in the construction of models to classify COVID-19 and non-COVID-19. A SARS-CoV-2 CT data-set is used in experimental tests. The CNNs implemented are visual geometry group (VGG-16 and VGG-19), inception V3 (IV3), and EfficientNet-B0 (EB0). The classification methods were k-nearest neighbor (KNN), support vector machine (SVM), and explainable deep neural networks (xDNN). In the experiments, the best results were obtained by the EfficientNet model used to extract data and the SVM with an RBF kernel. This approach achieved an average performance of 0.9856 in the precision macro, 0.9853 in the sensitivity macro, 0.9853 in the specificity macro, and 0.9853 in the F1 score macro. Springer US 2021-11-08 2023 /pmc/articles/PMC8572648/ /pubmed/34777680 http://dx.doi.org/10.1007/s11265-021-01714-7 Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Teodoro, Arthur A. M. Silva, Douglas H. Saadi, Muhammad Okey, Ogobuchi D. Rosa, Renata L. Otaibi, Sattam Al Rodríguez, Demóstenes Z. An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19 |
title | An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19 |
title_full | An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19 |
title_fullStr | An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19 |
title_full_unstemmed | An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19 |
title_short | An Analysis of Image Features Extracted by CNNs to Design Classification Models for COVID-19 and Non-COVID-19 |
title_sort | analysis of image features extracted by cnns to design classification models for covid-19 and non-covid-19 |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8572648/ https://www.ncbi.nlm.nih.gov/pubmed/34777680 http://dx.doi.org/10.1007/s11265-021-01714-7 |
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