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Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation
BACKGROUND: Mutation screening for gastrointestinal stromal tumor (GIST) is crucial and the c kit gene (KIT) exon 11 mutation is the most common type. This study aimed to explore the associations between GIST with KIT exon 11 mutation and contrast-enhanced computed tomography (CT) images. METHODS: P...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AME Publishing Company
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8573436/ https://www.ncbi.nlm.nih.gov/pubmed/34805358 http://dx.doi.org/10.21037/atm-21-3811 |
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author | Liu, Xijiao Yin, Yuan Wang, Xiaozhou Yang, Caiwei Wan, Shang Yin, Xiaonan Wu, Tingfan Chen, Huijiao Xu, Zhongming Li, Xin Song, Bin Zhang, Bo |
author_facet | Liu, Xijiao Yin, Yuan Wang, Xiaozhou Yang, Caiwei Wan, Shang Yin, Xiaonan Wu, Tingfan Chen, Huijiao Xu, Zhongming Li, Xin Song, Bin Zhang, Bo |
author_sort | Liu, Xijiao |
collection | PubMed |
description | BACKGROUND: Mutation screening for gastrointestinal stromal tumor (GIST) is crucial and the c kit gene (KIT) exon 11 mutation is the most common type. This study aimed to explore the associations between GIST with KIT exon 11 mutation and contrast-enhanced computed tomography (CT) images. METHODS: Pathologically proven GISTs with definitive genotype testing results in our hospital were retrospectively included. Abdominal contrast-enhanced CT images were analyzed. Conventional CT image features and radiomic features were recorded and extracted to build the following models: model ([CT]), model ([radiomic + clinic]) and model ([CT + radiomic + clinic]). The diagnostic performances of GISTs with KIT exon 11 mutation and KIT exon 11 deletion involving codons 557–558 were evaluated. RESULTS: In total, 327 GISTs (255 with KIT exon 11 mutation, and 73 with KIT exon 11 mutation deletion involving codons 557–558) were included. Significant CT features were found for GISTs with KIT exon 11 mutation. The area under curves (AUCs) of the models for KIT exon 11 mutation were 0.7158, 0.7530, and 0.8375 in the training cohort, and 0.6777, 0.7349, and 0.8105 in validation cohort, respectively. The AUCs of the models for KIT exon 11 mutation deletion involving codons 557–558 were 0.7155, 8621, and 0.8691 in the training cohort, and 0.7099, 0.8355, and 0.8488 in the validation cohort, respectively. The model ([CT + radiomic + clinic]) demonstrated the highest AUCs for prediction of KIT exon 11 mutation and those with deletion involving codons 557–558 (P<0.05), respectively. The model ([radiomic + clinic]) showed higher diagnostic performance than model ([CT]) significantly. CONCLUSIONS: Our results demonstrated the associations between GIST with KIT exon 11 mutation and contrast-enhanced CT images. We found combing conventional image analysis and texture analysis is a useful tool to distinguish GIST with KIT exon 11 mutation. CT radiogenomics exhibited good application potential in predict the KIT exon 11 mutation of GIST. |
format | Online Article Text |
id | pubmed-8573436 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | AME Publishing Company |
record_format | MEDLINE/PubMed |
spelling | pubmed-85734362021-11-18 Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation Liu, Xijiao Yin, Yuan Wang, Xiaozhou Yang, Caiwei Wan, Shang Yin, Xiaonan Wu, Tingfan Chen, Huijiao Xu, Zhongming Li, Xin Song, Bin Zhang, Bo Ann Transl Med Original Article BACKGROUND: Mutation screening for gastrointestinal stromal tumor (GIST) is crucial and the c kit gene (KIT) exon 11 mutation is the most common type. This study aimed to explore the associations between GIST with KIT exon 11 mutation and contrast-enhanced computed tomography (CT) images. METHODS: Pathologically proven GISTs with definitive genotype testing results in our hospital were retrospectively included. Abdominal contrast-enhanced CT images were analyzed. Conventional CT image features and radiomic features were recorded and extracted to build the following models: model ([CT]), model ([radiomic + clinic]) and model ([CT + radiomic + clinic]). The diagnostic performances of GISTs with KIT exon 11 mutation and KIT exon 11 deletion involving codons 557–558 were evaluated. RESULTS: In total, 327 GISTs (255 with KIT exon 11 mutation, and 73 with KIT exon 11 mutation deletion involving codons 557–558) were included. Significant CT features were found for GISTs with KIT exon 11 mutation. The area under curves (AUCs) of the models for KIT exon 11 mutation were 0.7158, 0.7530, and 0.8375 in the training cohort, and 0.6777, 0.7349, and 0.8105 in validation cohort, respectively. The AUCs of the models for KIT exon 11 mutation deletion involving codons 557–558 were 0.7155, 8621, and 0.8691 in the training cohort, and 0.7099, 0.8355, and 0.8488 in the validation cohort, respectively. The model ([CT + radiomic + clinic]) demonstrated the highest AUCs for prediction of KIT exon 11 mutation and those with deletion involving codons 557–558 (P<0.05), respectively. The model ([radiomic + clinic]) showed higher diagnostic performance than model ([CT]) significantly. CONCLUSIONS: Our results demonstrated the associations between GIST with KIT exon 11 mutation and contrast-enhanced CT images. We found combing conventional image analysis and texture analysis is a useful tool to distinguish GIST with KIT exon 11 mutation. CT radiogenomics exhibited good application potential in predict the KIT exon 11 mutation of GIST. AME Publishing Company 2021-10 /pmc/articles/PMC8573436/ /pubmed/34805358 http://dx.doi.org/10.21037/atm-21-3811 Text en 2021 Annals of Translational Medicine. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) . |
spellingShingle | Original Article Liu, Xijiao Yin, Yuan Wang, Xiaozhou Yang, Caiwei Wan, Shang Yin, Xiaonan Wu, Tingfan Chen, Huijiao Xu, Zhongming Li, Xin Song, Bin Zhang, Bo Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation |
title | Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation |
title_full | Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation |
title_fullStr | Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation |
title_full_unstemmed | Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation |
title_short | Gastrointestinal stromal tumors: associations between contrast-enhanced CT images and KIT exon 11 gene mutation |
title_sort | gastrointestinal stromal tumors: associations between contrast-enhanced ct images and kit exon 11 gene mutation |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8573436/ https://www.ncbi.nlm.nih.gov/pubmed/34805358 http://dx.doi.org/10.21037/atm-21-3811 |
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