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Identification of protein targets in red complex organisms binding with resveratrol
Periodontitis is attributed to the dental biofilm formation. Red complex organisms are a group of organisms linked with periodontal diseases. Therefore, it is of interest to identify potential targets from the red complex organisms to bind with the herbal compound resveratrol (E - 5 - (4 - hydroxy s...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Biomedical Informatics
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8573462/ https://www.ncbi.nlm.nih.gov/pubmed/34803257 http://dx.doi.org/10.6026/97320630016837 |
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author | Pothapur, Keshaav Krishnaa Vishnu Priya, Veeraraghavan Rengasamy, Gayathri Jayaseelan, Vijayashree Priyadharsini |
author_facet | Pothapur, Keshaav Krishnaa Vishnu Priya, Veeraraghavan Rengasamy, Gayathri Jayaseelan, Vijayashree Priyadharsini |
author_sort | Pothapur, Keshaav Krishnaa |
collection | PubMed |
description | Periodontitis is attributed to the dental biofilm formation. Red complex organisms are a group of organisms linked with periodontal diseases. Therefore, it is of interest to identify potential targets from the red complex organisms to bind with the herbal compound resveratrol (E - 5 - (4 - hydroxy styryl) benzene 1,3 diol). We report a list of potential proteins having optimal drug like binding features with the herbal agent Resveratrol for further consideration. We used the STITCH v.5 pipeline VICMPred and VirulentPred tools to identify such targets as potential virulent factors in the red complex organisms. We considered the strains of Porphyromonas gingivalis ATCC 33277, Treponema denticola ATCC 35405 and Tannerella forsythia ATCC 43037 in the red complex pathogens for this analysis. Protein targets in the red complex organisms with optimal binding features with the herbal compound resveratrol were thus identified and reported for further consideration. |
format | Online Article Text |
id | pubmed-8573462 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Biomedical Informatics |
record_format | MEDLINE/PubMed |
spelling | pubmed-85734622021-11-18 Identification of protein targets in red complex organisms binding with resveratrol Pothapur, Keshaav Krishnaa Vishnu Priya, Veeraraghavan Rengasamy, Gayathri Jayaseelan, Vijayashree Priyadharsini Bioinformation Research Article Periodontitis is attributed to the dental biofilm formation. Red complex organisms are a group of organisms linked with periodontal diseases. Therefore, it is of interest to identify potential targets from the red complex organisms to bind with the herbal compound resveratrol (E - 5 - (4 - hydroxy styryl) benzene 1,3 diol). We report a list of potential proteins having optimal drug like binding features with the herbal agent Resveratrol for further consideration. We used the STITCH v.5 pipeline VICMPred and VirulentPred tools to identify such targets as potential virulent factors in the red complex organisms. We considered the strains of Porphyromonas gingivalis ATCC 33277, Treponema denticola ATCC 35405 and Tannerella forsythia ATCC 43037 in the red complex pathogens for this analysis. Protein targets in the red complex organisms with optimal binding features with the herbal compound resveratrol were thus identified and reported for further consideration. Biomedical Informatics 2020-11-30 /pmc/articles/PMC8573462/ /pubmed/34803257 http://dx.doi.org/10.6026/97320630016837 Text en © 2020 Biomedical Informatics https://creativecommons.org/licenses/by/3.0/This is an Open Access article which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. This is distributed under the terms of the Creative Commons Attribution License. |
spellingShingle | Research Article Pothapur, Keshaav Krishnaa Vishnu Priya, Veeraraghavan Rengasamy, Gayathri Jayaseelan, Vijayashree Priyadharsini Identification of protein targets in red complex organisms binding with resveratrol |
title | Identification of protein targets in red complex organisms binding with resveratrol |
title_full | Identification of protein targets in red complex organisms binding with resveratrol |
title_fullStr | Identification of protein targets in red complex organisms binding with resveratrol |
title_full_unstemmed | Identification of protein targets in red complex organisms binding with resveratrol |
title_short | Identification of protein targets in red complex organisms binding with resveratrol |
title_sort | identification of protein targets in red complex organisms binding with resveratrol |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8573462/ https://www.ncbi.nlm.nih.gov/pubmed/34803257 http://dx.doi.org/10.6026/97320630016837 |
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