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O-Methylation in Carbohydrates: An NMR and MD Simulation Study with Application to Methylcellulose
[Image: see text] Methylated carbohydrates are important from both biological and technical perspectives. Specifically, methylcellulose is an interesting cellulose derivative that has applications in foods, materials, cosmetics, and many other fields. While the molecular dynamics simulation techniqu...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8573740/ https://www.ncbi.nlm.nih.gov/pubmed/34704449 http://dx.doi.org/10.1021/acs.jpcb.1c07293 |
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author | Ruda, Alessandro Widmalm, Göran Wohlert, Jakob |
author_facet | Ruda, Alessandro Widmalm, Göran Wohlert, Jakob |
author_sort | Ruda, Alessandro |
collection | PubMed |
description | [Image: see text] Methylated carbohydrates are important from both biological and technical perspectives. Specifically, methylcellulose is an interesting cellulose derivative that has applications in foods, materials, cosmetics, and many other fields. While the molecular dynamics simulation technique has the potential for both advancing the fundamental understanding of this polymer and aiding in the development of specific applications, a general drawback is the lack of experimentally validated interaction potentials for the methylated moieties. In the present study, simulations using the GROMOS 56 carbohydrate force field are compared to NMR spin–spin coupling constants related to the conformation of the exocyclic torsion angle ω in d-glucopyranose and derivatives containing a 6-O-methyl substituent and a (13)C-isotopologue thereof. A (3)J(CC) Karplus-type relationship is proposed for the C5–C6–O6–C(Me) torsion angle. Moreover, solvation free energies are compared to experimental data for small model compounds. Alkylation in the form of 6-O-methylation affects exocyclic torsion only marginally. Computed solvation free energies between nonmethylated and methylated molecules were internally consistent, which validates the application of these interaction potentials for more specialized purposes. |
format | Online Article Text |
id | pubmed-8573740 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-85737402021-11-09 O-Methylation in Carbohydrates: An NMR and MD Simulation Study with Application to Methylcellulose Ruda, Alessandro Widmalm, Göran Wohlert, Jakob J Phys Chem B [Image: see text] Methylated carbohydrates are important from both biological and technical perspectives. Specifically, methylcellulose is an interesting cellulose derivative that has applications in foods, materials, cosmetics, and many other fields. While the molecular dynamics simulation technique has the potential for both advancing the fundamental understanding of this polymer and aiding in the development of specific applications, a general drawback is the lack of experimentally validated interaction potentials for the methylated moieties. In the present study, simulations using the GROMOS 56 carbohydrate force field are compared to NMR spin–spin coupling constants related to the conformation of the exocyclic torsion angle ω in d-glucopyranose and derivatives containing a 6-O-methyl substituent and a (13)C-isotopologue thereof. A (3)J(CC) Karplus-type relationship is proposed for the C5–C6–O6–C(Me) torsion angle. Moreover, solvation free energies are compared to experimental data for small model compounds. Alkylation in the form of 6-O-methylation affects exocyclic torsion only marginally. Computed solvation free energies between nonmethylated and methylated molecules were internally consistent, which validates the application of these interaction potentials for more specialized purposes. American Chemical Society 2021-10-27 2021-11-04 /pmc/articles/PMC8573740/ /pubmed/34704449 http://dx.doi.org/10.1021/acs.jpcb.1c07293 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Ruda, Alessandro Widmalm, Göran Wohlert, Jakob O-Methylation in Carbohydrates: An NMR and MD Simulation Study with Application to Methylcellulose |
title | O-Methylation in Carbohydrates: An NMR and
MD Simulation Study with Application to Methylcellulose |
title_full | O-Methylation in Carbohydrates: An NMR and
MD Simulation Study with Application to Methylcellulose |
title_fullStr | O-Methylation in Carbohydrates: An NMR and
MD Simulation Study with Application to Methylcellulose |
title_full_unstemmed | O-Methylation in Carbohydrates: An NMR and
MD Simulation Study with Application to Methylcellulose |
title_short | O-Methylation in Carbohydrates: An NMR and
MD Simulation Study with Application to Methylcellulose |
title_sort | o-methylation in carbohydrates: an nmr and
md simulation study with application to methylcellulose |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8573740/ https://www.ncbi.nlm.nih.gov/pubmed/34704449 http://dx.doi.org/10.1021/acs.jpcb.1c07293 |
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