Identifying stress responsive genes using overlapping communities in co-expression networks

BACKGROUND: This paper proposes a workflow to identify genes that respond to specific treatments in plants. The workflow takes as input the RNA sequencing read counts and phenotypical data of different genotypes, measured under control and treatment conditions. It outputs a reduced group of genes ma...

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Detalles Bibliográficos
Autores principales: Riccio-Rengifo, Camila, Finke, Jorge, Rocha, Camilo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8574028/
https://www.ncbi.nlm.nih.gov/pubmed/34743699
http://dx.doi.org/10.1186/s12859-021-04462-4

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8574028/
https://www.ncbi.nlm.nih.gov/pubmed/34743699
http://dx.doi.org/10.1186/s12859-021-04462-4

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