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Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method

BACKGROUND: To classify chest computed tomography (CT) images as positive or negative for coronavirus disease 2019 (COVID-19) quickly and accurately, researchers attempted to develop effective models by using medical images. RESULTS: A convolutional neural network (CNN) ensemble model was developed...

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Autores principales: Chen, Yao-Mei, Chen, Yenming J., Ho, Wen-Hsien, Tsai, Jinn-Tsong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8574139/
https://www.ncbi.nlm.nih.gov/pubmed/34749629
http://dx.doi.org/10.1186/s12859-021-04083-x
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author Chen, Yao-Mei
Chen, Yenming J.
Ho, Wen-Hsien
Tsai, Jinn-Tsong
author_facet Chen, Yao-Mei
Chen, Yenming J.
Ho, Wen-Hsien
Tsai, Jinn-Tsong
author_sort Chen, Yao-Mei
collection PubMed
description BACKGROUND: To classify chest computed tomography (CT) images as positive or negative for coronavirus disease 2019 (COVID-19) quickly and accurately, researchers attempted to develop effective models by using medical images. RESULTS: A convolutional neural network (CNN) ensemble model was developed for classifying chest CT images as positive or negative for COVID-19. To classify chest CT images acquired from COVID-19 patients, the proposed COVID19-CNN ensemble model combines the use of multiple trained CNN models with a majority voting strategy. The CNN models were trained to classify chest CT images by transfer learning from well-known pre-trained CNN models and by applying their algorithm hyperparameters as appropriate. The combination of algorithm hyperparameters for a pre-trained CNN model was determined by uniform experimental design. The chest CT images (405 from COVID-19 patients and 397 from healthy patients) used for training and performance testing of the COVID19-CNN ensemble model were obtained from an earlier study by Hu in 2020. Experiments showed that, the COVID19-CNN ensemble model achieved 96.7% accuracy in classifying CT images as COVID-19 positive or negative, which was superior to the accuracies obtained by the individual trained CNN models. Other performance measures (i.e., precision, recall, specificity, and F(1)-score) obtained bythe COVID19-CNN ensemble model were higher than those obtained by individual trained CNN models. CONCLUSIONS: The COVID19-CNN ensemble model had superior accuracy and excellent capability in classifying chest CT images as COVID-19 positive or negative.
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spelling pubmed-85741392021-11-08 Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method Chen, Yao-Mei Chen, Yenming J. Ho, Wen-Hsien Tsai, Jinn-Tsong BMC Bioinformatics Research BACKGROUND: To classify chest computed tomography (CT) images as positive or negative for coronavirus disease 2019 (COVID-19) quickly and accurately, researchers attempted to develop effective models by using medical images. RESULTS: A convolutional neural network (CNN) ensemble model was developed for classifying chest CT images as positive or negative for COVID-19. To classify chest CT images acquired from COVID-19 patients, the proposed COVID19-CNN ensemble model combines the use of multiple trained CNN models with a majority voting strategy. The CNN models were trained to classify chest CT images by transfer learning from well-known pre-trained CNN models and by applying their algorithm hyperparameters as appropriate. The combination of algorithm hyperparameters for a pre-trained CNN model was determined by uniform experimental design. The chest CT images (405 from COVID-19 patients and 397 from healthy patients) used for training and performance testing of the COVID19-CNN ensemble model were obtained from an earlier study by Hu in 2020. Experiments showed that, the COVID19-CNN ensemble model achieved 96.7% accuracy in classifying CT images as COVID-19 positive or negative, which was superior to the accuracies obtained by the individual trained CNN models. Other performance measures (i.e., precision, recall, specificity, and F(1)-score) obtained bythe COVID19-CNN ensemble model were higher than those obtained by individual trained CNN models. CONCLUSIONS: The COVID19-CNN ensemble model had superior accuracy and excellent capability in classifying chest CT images as COVID-19 positive or negative. BioMed Central 2021-11-08 /pmc/articles/PMC8574139/ /pubmed/34749629 http://dx.doi.org/10.1186/s12859-021-04083-x Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Chen, Yao-Mei
Chen, Yenming J.
Ho, Wen-Hsien
Tsai, Jinn-Tsong
Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method
title Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method
title_full Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method
title_fullStr Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method
title_full_unstemmed Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method
title_short Classifying chest CT images as COVID-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method
title_sort classifying chest ct images as covid-19 positive/negative using a convolutional neural network ensemble model and uniform experimental design method
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8574139/
https://www.ncbi.nlm.nih.gov/pubmed/34749629
http://dx.doi.org/10.1186/s12859-021-04083-x
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