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Application of single-cell RNA sequencing technology in liver diseases: a narrative review

OBJECTIVE: This review aimed to summarize the application of single-cell transcriptome sequencing technology in liver diseases. BACKGROUND: The increasing application of single-cell ribonucleic acid (RNA) sequencing (scRNA-seq) in life science and biomedical research has greatly improved our underst...

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Autores principales: He, Lian, Lu, Anjing, Qin, Lin, Zhang, Qianru, Ling, Hua, Tan, Daopeng, He, Yuqi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AME Publishing Company 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8576673/
https://www.ncbi.nlm.nih.gov/pubmed/34790804
http://dx.doi.org/10.21037/atm-21-4824
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author He, Lian
Lu, Anjing
Qin, Lin
Zhang, Qianru
Ling, Hua
Tan, Daopeng
He, Yuqi
author_facet He, Lian
Lu, Anjing
Qin, Lin
Zhang, Qianru
Ling, Hua
Tan, Daopeng
He, Yuqi
author_sort He, Lian
collection PubMed
description OBJECTIVE: This review aimed to summarize the application of single-cell transcriptome sequencing technology in liver diseases. BACKGROUND: The increasing application of single-cell ribonucleic acid (RNA) sequencing (scRNA-seq) in life science and biomedical research has greatly improved our understanding of cellular heterogeneity in immunology, oncology, and developmental biology. scRNA-seq has proven to be a powerful tool for identifying and classifying cell subsets, characterizing rare or small cell subsets and tracking cell differentiation along the dynamic cell stages. Globally, liver disease has high rates of morbidity and mortality, and its exact pathological mechanism remains unclear, current treatment options are limited to clearance of the underlying cause or liver transplantation, which cannot overwhelm and cure liver diseases. scRNA-seq provides many novel insights for healthy and diseased livers. METHODS: In this review, we searched for related articles in the PubMed database and summarized the advances of scRNA-seq in revealing the molecular mechanisms of liver development, regeneration, and disease. We also discussed the challenges and future application potential of scRNA-seq, which is expected to enhance the ability to explore the field of liver research and accelerate the clinical application of liver precision medicine. CONCLUSIONS: With the continuous improvement of scRNA-seq technology, scRNA-seq is expected to unlock new avenues for liver biology exploration, liver disease diagnosis, and personalized treatment, which will pave the way for breakthrough innovation in personalized medicine.
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spelling pubmed-85766732021-11-16 Application of single-cell RNA sequencing technology in liver diseases: a narrative review He, Lian Lu, Anjing Qin, Lin Zhang, Qianru Ling, Hua Tan, Daopeng He, Yuqi Ann Transl Med Review Article OBJECTIVE: This review aimed to summarize the application of single-cell transcriptome sequencing technology in liver diseases. BACKGROUND: The increasing application of single-cell ribonucleic acid (RNA) sequencing (scRNA-seq) in life science and biomedical research has greatly improved our understanding of cellular heterogeneity in immunology, oncology, and developmental biology. scRNA-seq has proven to be a powerful tool for identifying and classifying cell subsets, characterizing rare or small cell subsets and tracking cell differentiation along the dynamic cell stages. Globally, liver disease has high rates of morbidity and mortality, and its exact pathological mechanism remains unclear, current treatment options are limited to clearance of the underlying cause or liver transplantation, which cannot overwhelm and cure liver diseases. scRNA-seq provides many novel insights for healthy and diseased livers. METHODS: In this review, we searched for related articles in the PubMed database and summarized the advances of scRNA-seq in revealing the molecular mechanisms of liver development, regeneration, and disease. We also discussed the challenges and future application potential of scRNA-seq, which is expected to enhance the ability to explore the field of liver research and accelerate the clinical application of liver precision medicine. CONCLUSIONS: With the continuous improvement of scRNA-seq technology, scRNA-seq is expected to unlock new avenues for liver biology exploration, liver disease diagnosis, and personalized treatment, which will pave the way for breakthrough innovation in personalized medicine. AME Publishing Company 2021-10 /pmc/articles/PMC8576673/ /pubmed/34790804 http://dx.doi.org/10.21037/atm-21-4824 Text en 2021 Annals of Translational Medicine. All rights reserved. https://creativecommons.org/licenses/by-nc-nd/4.0/Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) .
spellingShingle Review Article
He, Lian
Lu, Anjing
Qin, Lin
Zhang, Qianru
Ling, Hua
Tan, Daopeng
He, Yuqi
Application of single-cell RNA sequencing technology in liver diseases: a narrative review
title Application of single-cell RNA sequencing technology in liver diseases: a narrative review
title_full Application of single-cell RNA sequencing technology in liver diseases: a narrative review
title_fullStr Application of single-cell RNA sequencing technology in liver diseases: a narrative review
title_full_unstemmed Application of single-cell RNA sequencing technology in liver diseases: a narrative review
title_short Application of single-cell RNA sequencing technology in liver diseases: a narrative review
title_sort application of single-cell rna sequencing technology in liver diseases: a narrative review
topic Review Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8576673/
https://www.ncbi.nlm.nih.gov/pubmed/34790804
http://dx.doi.org/10.21037/atm-21-4824
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