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Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty
Ectopic beats (EBs) are cellular arrhythmias that can trigger lethal arrhythmias. Simulations using biophysically-detailed cardiac myocyte models can reveal how model parameters influence the probability of these cellular arrhythmias, however such analyses can pose a huge computational burden. Here,...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8577785/ https://www.ncbi.nlm.nih.gov/pubmed/34665814 http://dx.doi.org/10.1371/journal.pcbi.1009536 |
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author | Jin, Qingchu Greenstein, Joseph L. Winslow, Raimond L. |
author_facet | Jin, Qingchu Greenstein, Joseph L. Winslow, Raimond L. |
author_sort | Jin, Qingchu |
collection | PubMed |
description | Ectopic beats (EBs) are cellular arrhythmias that can trigger lethal arrhythmias. Simulations using biophysically-detailed cardiac myocyte models can reveal how model parameters influence the probability of these cellular arrhythmias, however such analyses can pose a huge computational burden. Here, we develop a simplified approach in which logistic regression models (LRMs) are used to define a mapping between the parameters of complex cell models and the probability of EBs (P(EB)). As an example, in this study, we build an LRM for P(EB) as a function of the initial value of diastolic cytosolic Ca(2+) concentration ([Ca(2+)](i)(ini)), the initial state of sarcoplasmic reticulum (SR) Ca(2+) load ([Ca(2+)](SR)(ini)), and kinetic parameters of the inward rectifier K(+) current (I(K1)) and ryanodine receptor (RyR). This approach, which we refer to as arrhythmia sensitivity analysis, allows for evaluation of the relationship between these arrhythmic event probabilities and their associated parameters. This LRM is also used to demonstrate how uncertainties in experimentally measured values determine the uncertainty in P(EB). In a study of the role of [Ca(2+)](SR)(ini) uncertainty, we show a special property of the uncertainty in P(EB), where with increasing [Ca(2+)](SR)(ini) uncertainty, P(EB) uncertainty first increases and then decreases. Lastly, we demonstrate that I(K1) suppression, at the level that occurs in heart failure myocytes, increases P(EB). |
format | Online Article Text |
id | pubmed-8577785 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-85777852021-11-10 Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty Jin, Qingchu Greenstein, Joseph L. Winslow, Raimond L. PLoS Comput Biol Research Article Ectopic beats (EBs) are cellular arrhythmias that can trigger lethal arrhythmias. Simulations using biophysically-detailed cardiac myocyte models can reveal how model parameters influence the probability of these cellular arrhythmias, however such analyses can pose a huge computational burden. Here, we develop a simplified approach in which logistic regression models (LRMs) are used to define a mapping between the parameters of complex cell models and the probability of EBs (P(EB)). As an example, in this study, we build an LRM for P(EB) as a function of the initial value of diastolic cytosolic Ca(2+) concentration ([Ca(2+)](i)(ini)), the initial state of sarcoplasmic reticulum (SR) Ca(2+) load ([Ca(2+)](SR)(ini)), and kinetic parameters of the inward rectifier K(+) current (I(K1)) and ryanodine receptor (RyR). This approach, which we refer to as arrhythmia sensitivity analysis, allows for evaluation of the relationship between these arrhythmic event probabilities and their associated parameters. This LRM is also used to demonstrate how uncertainties in experimentally measured values determine the uncertainty in P(EB). In a study of the role of [Ca(2+)](SR)(ini) uncertainty, we show a special property of the uncertainty in P(EB), where with increasing [Ca(2+)](SR)(ini) uncertainty, P(EB) uncertainty first increases and then decreases. Lastly, we demonstrate that I(K1) suppression, at the level that occurs in heart failure myocytes, increases P(EB). Public Library of Science 2021-10-19 /pmc/articles/PMC8577785/ /pubmed/34665814 http://dx.doi.org/10.1371/journal.pcbi.1009536 Text en © 2021 Jin et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Jin, Qingchu Greenstein, Joseph L. Winslow, Raimond L. Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty |
title | Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty |
title_full | Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty |
title_fullStr | Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty |
title_full_unstemmed | Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty |
title_short | Estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty |
title_sort | estimating ectopic beat probability with simplified statistical models that account for experimental uncertainty |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8577785/ https://www.ncbi.nlm.nih.gov/pubmed/34665814 http://dx.doi.org/10.1371/journal.pcbi.1009536 |
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