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A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging

Assessing immune responses and cell death in Nicotiana benthamiana leaf agro‐infiltration assays is a powerful and widely used experimental approach in molecular plant pathology. Here, we describe a reliable high‐throughput protocol to quantify strong, macroscopically visible cell death responses in...

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Detalles Bibliográficos
Autores principales: Xi, Yuxuan, Chochois, Vincent, Kroj, Thomas, Cesari, Stella
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578831/
https://www.ncbi.nlm.nih.gov/pubmed/34427040
http://dx.doi.org/10.1111/mpp.13129
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author Xi, Yuxuan
Chochois, Vincent
Kroj, Thomas
Cesari, Stella
author_facet Xi, Yuxuan
Chochois, Vincent
Kroj, Thomas
Cesari, Stella
author_sort Xi, Yuxuan
collection PubMed
description Assessing immune responses and cell death in Nicotiana benthamiana leaf agro‐infiltration assays is a powerful and widely used experimental approach in molecular plant pathology. Here, we describe a reliable high‐throughput protocol to quantify strong, macroscopically visible cell death responses in N. benthamiana agro‐infiltration assays. The method relies on measuring the reduction of leaf autofluorescence in the red spectrum upon cell death induction and provides quantitative data suitable for straightforward statistical analysis. Two different well‐established model nucleotide‐binding and leucine‐rich repeat domain proteins (NLRs) were used to ensure the genericity of the approach. Its accuracy and versatility were compared to visual scoring of the cell death response and standard methods commonly used to characterize NLR activities in N. benthamiana. A discussion of the advantages and limitations of our method compared to other protocols demonstrates its robustness and versatility and provides an effective means to select the best‐suited protocol for a defined experiment.
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spelling pubmed-85788312021-11-15 A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging Xi, Yuxuan Chochois, Vincent Kroj, Thomas Cesari, Stella Mol Plant Pathol Technical Advance Assessing immune responses and cell death in Nicotiana benthamiana leaf agro‐infiltration assays is a powerful and widely used experimental approach in molecular plant pathology. Here, we describe a reliable high‐throughput protocol to quantify strong, macroscopically visible cell death responses in N. benthamiana agro‐infiltration assays. The method relies on measuring the reduction of leaf autofluorescence in the red spectrum upon cell death induction and provides quantitative data suitable for straightforward statistical analysis. Two different well‐established model nucleotide‐binding and leucine‐rich repeat domain proteins (NLRs) were used to ensure the genericity of the approach. Its accuracy and versatility were compared to visual scoring of the cell death response and standard methods commonly used to characterize NLR activities in N. benthamiana. A discussion of the advantages and limitations of our method compared to other protocols demonstrates its robustness and versatility and provides an effective means to select the best‐suited protocol for a defined experiment. John Wiley and Sons Inc. 2021-08-23 /pmc/articles/PMC8578831/ /pubmed/34427040 http://dx.doi.org/10.1111/mpp.13129 Text en © 2021 The Authors. Molecular Plant Pathology published by British Society for Plant Pathology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Technical Advance
Xi, Yuxuan
Chochois, Vincent
Kroj, Thomas
Cesari, Stella
A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging
title A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging
title_full A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging
title_fullStr A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging
title_full_unstemmed A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging
title_short A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging
title_sort novel robust and high‐throughput method to measure cell death in nicotiana benthamiana leaves by fluorescence imaging
topic Technical Advance
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578831/
https://www.ncbi.nlm.nih.gov/pubmed/34427040
http://dx.doi.org/10.1111/mpp.13129
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