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A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging
Assessing immune responses and cell death in Nicotiana benthamiana leaf agro‐infiltration assays is a powerful and widely used experimental approach in molecular plant pathology. Here, we describe a reliable high‐throughput protocol to quantify strong, macroscopically visible cell death responses in...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578831/ https://www.ncbi.nlm.nih.gov/pubmed/34427040 http://dx.doi.org/10.1111/mpp.13129 |
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author | Xi, Yuxuan Chochois, Vincent Kroj, Thomas Cesari, Stella |
author_facet | Xi, Yuxuan Chochois, Vincent Kroj, Thomas Cesari, Stella |
author_sort | Xi, Yuxuan |
collection | PubMed |
description | Assessing immune responses and cell death in Nicotiana benthamiana leaf agro‐infiltration assays is a powerful and widely used experimental approach in molecular plant pathology. Here, we describe a reliable high‐throughput protocol to quantify strong, macroscopically visible cell death responses in N. benthamiana agro‐infiltration assays. The method relies on measuring the reduction of leaf autofluorescence in the red spectrum upon cell death induction and provides quantitative data suitable for straightforward statistical analysis. Two different well‐established model nucleotide‐binding and leucine‐rich repeat domain proteins (NLRs) were used to ensure the genericity of the approach. Its accuracy and versatility were compared to visual scoring of the cell death response and standard methods commonly used to characterize NLR activities in N. benthamiana. A discussion of the advantages and limitations of our method compared to other protocols demonstrates its robustness and versatility and provides an effective means to select the best‐suited protocol for a defined experiment. |
format | Online Article Text |
id | pubmed-8578831 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85788312021-11-15 A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging Xi, Yuxuan Chochois, Vincent Kroj, Thomas Cesari, Stella Mol Plant Pathol Technical Advance Assessing immune responses and cell death in Nicotiana benthamiana leaf agro‐infiltration assays is a powerful and widely used experimental approach in molecular plant pathology. Here, we describe a reliable high‐throughput protocol to quantify strong, macroscopically visible cell death responses in N. benthamiana agro‐infiltration assays. The method relies on measuring the reduction of leaf autofluorescence in the red spectrum upon cell death induction and provides quantitative data suitable for straightforward statistical analysis. Two different well‐established model nucleotide‐binding and leucine‐rich repeat domain proteins (NLRs) were used to ensure the genericity of the approach. Its accuracy and versatility were compared to visual scoring of the cell death response and standard methods commonly used to characterize NLR activities in N. benthamiana. A discussion of the advantages and limitations of our method compared to other protocols demonstrates its robustness and versatility and provides an effective means to select the best‐suited protocol for a defined experiment. John Wiley and Sons Inc. 2021-08-23 /pmc/articles/PMC8578831/ /pubmed/34427040 http://dx.doi.org/10.1111/mpp.13129 Text en © 2021 The Authors. Molecular Plant Pathology published by British Society for Plant Pathology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Technical Advance Xi, Yuxuan Chochois, Vincent Kroj, Thomas Cesari, Stella A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging |
title | A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging |
title_full | A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging |
title_fullStr | A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging |
title_full_unstemmed | A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging |
title_short | A novel robust and high‐throughput method to measure cell death in Nicotiana benthamiana leaves by fluorescence imaging |
title_sort | novel robust and high‐throughput method to measure cell death in nicotiana benthamiana leaves by fluorescence imaging |
topic | Technical Advance |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578831/ https://www.ncbi.nlm.nih.gov/pubmed/34427040 http://dx.doi.org/10.1111/mpp.13129 |
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