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Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis

Tumor-infiltrating immune cells, associated with tumor progression, are promising prognostic biomarkers. However, the relationship between levels of gene expression and that of immune cell infiltration in cervical cancer prognosis is unknown. In this study, three cervical cancer gene expression micr...

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Detalles Bibliográficos
Autores principales: Zhang, Shun, Wan, Junhui, Chen, Minjie, Cai, Desheng, Xu, Junlan, Chen, Qi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578845/
https://www.ncbi.nlm.nih.gov/pubmed/34778035
http://dx.doi.org/10.3389/fonc.2021.720447
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author Zhang, Shun
Wan, Junhui
Chen, Minjie
Cai, Desheng
Xu, Junlan
Chen, Qi
author_facet Zhang, Shun
Wan, Junhui
Chen, Minjie
Cai, Desheng
Xu, Junlan
Chen, Qi
author_sort Zhang, Shun
collection PubMed
description Tumor-infiltrating immune cells, associated with tumor progression, are promising prognostic biomarkers. However, the relationship between levels of gene expression and that of immune cell infiltration in cervical cancer prognosis is unknown. In this study, three cervical cancer gene expression microarrays (GSE6791, GSE63678 and GSE55940) were obtained from the GEO database. The IDO1 gene was identified by differentially expressed gene screening. The gene expression profiles of TCGA and GTEx databases along with comprehensive bioinformatics analysis identified that the IDO1 gene was upregulated in cervical cancer with significant difference in expression at different N stages. In addition, it was also upregulated in HPV16 positive sample. The pan-cancer analysis identified that IDO1 was highly expressed in most cancers. TIMER analysis revealed that the expression of IDO1 in CESC shows positive correlation with CD8(+) T cells, CD4(+) T cells, neutrophils, dendritic cells. IDO1 expression showed remarkable positive correlation with all immune cell markers except M1 macrophages. CD8(+) T cell infiltration GSEA results showed that IDO1 was mainly associated with tumor immune-related signaling pathways.
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spelling pubmed-85788452021-11-11 Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis Zhang, Shun Wan, Junhui Chen, Minjie Cai, Desheng Xu, Junlan Chen, Qi Front Oncol Oncology Tumor-infiltrating immune cells, associated with tumor progression, are promising prognostic biomarkers. However, the relationship between levels of gene expression and that of immune cell infiltration in cervical cancer prognosis is unknown. In this study, three cervical cancer gene expression microarrays (GSE6791, GSE63678 and GSE55940) were obtained from the GEO database. The IDO1 gene was identified by differentially expressed gene screening. The gene expression profiles of TCGA and GTEx databases along with comprehensive bioinformatics analysis identified that the IDO1 gene was upregulated in cervical cancer with significant difference in expression at different N stages. In addition, it was also upregulated in HPV16 positive sample. The pan-cancer analysis identified that IDO1 was highly expressed in most cancers. TIMER analysis revealed that the expression of IDO1 in CESC shows positive correlation with CD8(+) T cells, CD4(+) T cells, neutrophils, dendritic cells. IDO1 expression showed remarkable positive correlation with all immune cell markers except M1 macrophages. CD8(+) T cell infiltration GSEA results showed that IDO1 was mainly associated with tumor immune-related signaling pathways. Frontiers Media S.A. 2021-10-27 /pmc/articles/PMC8578845/ /pubmed/34778035 http://dx.doi.org/10.3389/fonc.2021.720447 Text en Copyright © 2021 Zhang, Wan, Chen, Cai, Xu and Chen https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Zhang, Shun
Wan, Junhui
Chen, Minjie
Cai, Desheng
Xu, Junlan
Chen, Qi
Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis
title Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis
title_full Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis
title_fullStr Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis
title_full_unstemmed Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis
title_short Tumor-Infiltrating CD8+ T Cells Driven by the Immune Checkpoint-Associated Gene IDO1 Are Associated With Cervical Cancer Prognosis
title_sort tumor-infiltrating cd8+ t cells driven by the immune checkpoint-associated gene ido1 are associated with cervical cancer prognosis
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8578845/
https://www.ncbi.nlm.nih.gov/pubmed/34778035
http://dx.doi.org/10.3389/fonc.2021.720447
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