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Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI
BACKGROUND: Although accurate treatment response assessment for brain metastases (BMs) is crucial, it is highly labor intensive. This retrospective study aimed to develop a computer-aided detection (CAD) system for automated BM detection and treatment response evaluation using deep learning. METHODS...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8579083/ https://www.ncbi.nlm.nih.gov/pubmed/34778056 http://dx.doi.org/10.3389/fonc.2021.739639 |
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author | Cho, Jungheum Kim, Young Jae Sunwoo, Leonard Lee, Gi Pyo Nguyen, Toan Quang Cho, Se Jin Baik, Sung Hyun Bae, Yun Jung Choi, Byung Se Jung, Cheolkyu Sohn, Chul-Ho Han, Jung-Ho Kim, Chae-Yong Kim, Kwang Gi Kim, Jae Hyoung |
author_facet | Cho, Jungheum Kim, Young Jae Sunwoo, Leonard Lee, Gi Pyo Nguyen, Toan Quang Cho, Se Jin Baik, Sung Hyun Bae, Yun Jung Choi, Byung Se Jung, Cheolkyu Sohn, Chul-Ho Han, Jung-Ho Kim, Chae-Yong Kim, Kwang Gi Kim, Jae Hyoung |
author_sort | Cho, Jungheum |
collection | PubMed |
description | BACKGROUND: Although accurate treatment response assessment for brain metastases (BMs) is crucial, it is highly labor intensive. This retrospective study aimed to develop a computer-aided detection (CAD) system for automated BM detection and treatment response evaluation using deep learning. METHODS: We included 214 consecutive MRI examinations of 147 patients with BM obtained between January 2015 and August 2016. These were divided into the training (174 MR images from 127 patients) and test datasets according to temporal separation (temporal test set #1; 40 MR images from 20 patients). For external validation, 24 patients with BM and 11 patients without BM from other institutions were included (geographic test set). In addition, we included 12 MRIs from BM patients obtained between August 2017 and March 2020 (temporal test set #2). Detection sensitivity, dice similarity coefficient (DSC) for segmentation, and agreements in one-dimensional and volumetric Response Assessment in Neuro-Oncology Brain Metastases (RANO-BM) criteria between CAD and radiologists were assessed. RESULTS: In the temporal test set #1, the sensitivity was 75.1% (95% confidence interval [CI]: 69.6%, 79.9%), mean DSC was 0.69 ± 0.22, and false-positive (FP) rate per scan was 0.8 for BM ≥ 5 mm. Agreements in the RANO-BM criteria were moderate (κ, 0.52) and substantial (κ, 0.68) for one-dimensional and volumetric, respectively. In the geographic test set, sensitivity was 87.7% (95% CI: 77.2%, 94.5%), mean DSC was 0.68 ± 0.20, and FP rate per scan was 1.9 for BM ≥ 5 mm. In the temporal test set #2, sensitivity was 94.7% (95% CI: 74.0%, 99.9%), mean DSC was 0.82 ± 0.20, and FP per scan was 0.5 (6/12) for BM ≥ 5 mm. CONCLUSIONS: Our CAD showed potential for automated treatment response assessment of BM ≥ 5 mm. |
format | Online Article Text |
id | pubmed-8579083 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85790832021-11-11 Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI Cho, Jungheum Kim, Young Jae Sunwoo, Leonard Lee, Gi Pyo Nguyen, Toan Quang Cho, Se Jin Baik, Sung Hyun Bae, Yun Jung Choi, Byung Se Jung, Cheolkyu Sohn, Chul-Ho Han, Jung-Ho Kim, Chae-Yong Kim, Kwang Gi Kim, Jae Hyoung Front Oncol Oncology BACKGROUND: Although accurate treatment response assessment for brain metastases (BMs) is crucial, it is highly labor intensive. This retrospective study aimed to develop a computer-aided detection (CAD) system for automated BM detection and treatment response evaluation using deep learning. METHODS: We included 214 consecutive MRI examinations of 147 patients with BM obtained between January 2015 and August 2016. These were divided into the training (174 MR images from 127 patients) and test datasets according to temporal separation (temporal test set #1; 40 MR images from 20 patients). For external validation, 24 patients with BM and 11 patients without BM from other institutions were included (geographic test set). In addition, we included 12 MRIs from BM patients obtained between August 2017 and March 2020 (temporal test set #2). Detection sensitivity, dice similarity coefficient (DSC) for segmentation, and agreements in one-dimensional and volumetric Response Assessment in Neuro-Oncology Brain Metastases (RANO-BM) criteria between CAD and radiologists were assessed. RESULTS: In the temporal test set #1, the sensitivity was 75.1% (95% confidence interval [CI]: 69.6%, 79.9%), mean DSC was 0.69 ± 0.22, and false-positive (FP) rate per scan was 0.8 for BM ≥ 5 mm. Agreements in the RANO-BM criteria were moderate (κ, 0.52) and substantial (κ, 0.68) for one-dimensional and volumetric, respectively. In the geographic test set, sensitivity was 87.7% (95% CI: 77.2%, 94.5%), mean DSC was 0.68 ± 0.20, and FP rate per scan was 1.9 for BM ≥ 5 mm. In the temporal test set #2, sensitivity was 94.7% (95% CI: 74.0%, 99.9%), mean DSC was 0.82 ± 0.20, and FP per scan was 0.5 (6/12) for BM ≥ 5 mm. CONCLUSIONS: Our CAD showed potential for automated treatment response assessment of BM ≥ 5 mm. Frontiers Media S.A. 2021-10-27 /pmc/articles/PMC8579083/ /pubmed/34778056 http://dx.doi.org/10.3389/fonc.2021.739639 Text en Copyright © 2021 Cho, Kim, Sunwoo, Lee, Nguyen, Cho, Baik, Bae, Choi, Jung, Sohn, Han, Kim, Kim and Kim https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Cho, Jungheum Kim, Young Jae Sunwoo, Leonard Lee, Gi Pyo Nguyen, Toan Quang Cho, Se Jin Baik, Sung Hyun Bae, Yun Jung Choi, Byung Se Jung, Cheolkyu Sohn, Chul-Ho Han, Jung-Ho Kim, Chae-Yong Kim, Kwang Gi Kim, Jae Hyoung Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI |
title | Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI |
title_full | Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI |
title_fullStr | Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI |
title_full_unstemmed | Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI |
title_short | Deep Learning-Based Computer-Aided Detection System for Automated Treatment Response Assessment of Brain Metastases on 3D MRI |
title_sort | deep learning-based computer-aided detection system for automated treatment response assessment of brain metastases on 3d mri |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8579083/ https://www.ncbi.nlm.nih.gov/pubmed/34778056 http://dx.doi.org/10.3389/fonc.2021.739639 |
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