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A geno-clinical decision model for the diagnosis of myelodysplastic syndromes
The differential diagnosis of myeloid malignancies is challenging and subject to interobserver variability. We used clinical and next-generation sequencing (NGS) data to develop a machine learning model for the diagnosis of myeloid malignancies independent of bone marrow biopsy data based on a 3-ins...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society of Hematology
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8579270/ https://www.ncbi.nlm.nih.gov/pubmed/34592765 http://dx.doi.org/10.1182/bloodadvances.2021004755 |
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author | Radakovich, Nathan Meggendorfer, Manja Malcovati, Luca Hilton, C. Beau Sekeres, Mikkael A. Shreve, Jacob Rouphail, Yazan Walter, Wencke Hutter, Stephan Galli, Anna Pozzi, Sara Elena, Chiara Padron, Eric Savona, Michael R. Gerds, Aaron T. Mukherjee, Sudipto Nagata, Yasunobu Komrokji, Rami S. Jha, Babal K. Haferlach, Claudia Maciejewski, Jaroslaw P. Haferlach, Torsten Nazha, Aziz |
author_facet | Radakovich, Nathan Meggendorfer, Manja Malcovati, Luca Hilton, C. Beau Sekeres, Mikkael A. Shreve, Jacob Rouphail, Yazan Walter, Wencke Hutter, Stephan Galli, Anna Pozzi, Sara Elena, Chiara Padron, Eric Savona, Michael R. Gerds, Aaron T. Mukherjee, Sudipto Nagata, Yasunobu Komrokji, Rami S. Jha, Babal K. Haferlach, Claudia Maciejewski, Jaroslaw P. Haferlach, Torsten Nazha, Aziz |
author_sort | Radakovich, Nathan |
collection | PubMed |
description | The differential diagnosis of myeloid malignancies is challenging and subject to interobserver variability. We used clinical and next-generation sequencing (NGS) data to develop a machine learning model for the diagnosis of myeloid malignancies independent of bone marrow biopsy data based on a 3-institution, international cohort of patients. The model achieves high performance, with model interpretations indicating that it relies on factors similar to those used by clinicians. In addition, we describe associations between NGS findings and clinically important phenotypes and introduce the use of machine learning algorithms to elucidate clinicogenomic relationships. |
format | Online Article Text |
id | pubmed-8579270 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Society of Hematology |
record_format | MEDLINE/PubMed |
spelling | pubmed-85792702021-11-10 A geno-clinical decision model for the diagnosis of myelodysplastic syndromes Radakovich, Nathan Meggendorfer, Manja Malcovati, Luca Hilton, C. Beau Sekeres, Mikkael A. Shreve, Jacob Rouphail, Yazan Walter, Wencke Hutter, Stephan Galli, Anna Pozzi, Sara Elena, Chiara Padron, Eric Savona, Michael R. Gerds, Aaron T. Mukherjee, Sudipto Nagata, Yasunobu Komrokji, Rami S. Jha, Babal K. Haferlach, Claudia Maciejewski, Jaroslaw P. Haferlach, Torsten Nazha, Aziz Blood Adv Myeloid Neoplasia The differential diagnosis of myeloid malignancies is challenging and subject to interobserver variability. We used clinical and next-generation sequencing (NGS) data to develop a machine learning model for the diagnosis of myeloid malignancies independent of bone marrow biopsy data based on a 3-institution, international cohort of patients. The model achieves high performance, with model interpretations indicating that it relies on factors similar to those used by clinicians. In addition, we describe associations between NGS findings and clinically important phenotypes and introduce the use of machine learning algorithms to elucidate clinicogenomic relationships. American Society of Hematology 2021-10-29 /pmc/articles/PMC8579270/ /pubmed/34592765 http://dx.doi.org/10.1182/bloodadvances.2021004755 Text en © 2021 by The American Society of Hematology. Licensed under Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0), permitting only noncommercial, nonderivative use with attribution. All other rights reserved. |
spellingShingle | Myeloid Neoplasia Radakovich, Nathan Meggendorfer, Manja Malcovati, Luca Hilton, C. Beau Sekeres, Mikkael A. Shreve, Jacob Rouphail, Yazan Walter, Wencke Hutter, Stephan Galli, Anna Pozzi, Sara Elena, Chiara Padron, Eric Savona, Michael R. Gerds, Aaron T. Mukherjee, Sudipto Nagata, Yasunobu Komrokji, Rami S. Jha, Babal K. Haferlach, Claudia Maciejewski, Jaroslaw P. Haferlach, Torsten Nazha, Aziz A geno-clinical decision model for the diagnosis of myelodysplastic syndromes |
title | A geno-clinical decision model for the diagnosis of myelodysplastic syndromes |
title_full | A geno-clinical decision model for the diagnosis of myelodysplastic syndromes |
title_fullStr | A geno-clinical decision model for the diagnosis of myelodysplastic syndromes |
title_full_unstemmed | A geno-clinical decision model for the diagnosis of myelodysplastic syndromes |
title_short | A geno-clinical decision model for the diagnosis of myelodysplastic syndromes |
title_sort | geno-clinical decision model for the diagnosis of myelodysplastic syndromes |
topic | Myeloid Neoplasia |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8579270/ https://www.ncbi.nlm.nih.gov/pubmed/34592765 http://dx.doi.org/10.1182/bloodadvances.2021004755 |
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