Cargando…

Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support

BACKGROUND: Amyloid-β (Aβ) PET has emerged as clinically useful for more accurate diagnosis of patients with cognitive decline. Aβ deposition is a necessary cause or response to the cellular pathology of Alzheimer’s disease (AD). Usual clinical and research interpretation of amyloid PET does not ful...

Descripción completa

Detalles Bibliográficos
Autores principales: Venkataraman, Ashwin V., Bai, Wenjia, Whittington, Alex, Myers, James F., Rabiner, Eugenii A., Lingford-Hughes, Anne, Matthews, Paul M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8582159/
https://www.ncbi.nlm.nih.gov/pubmed/34758867
http://dx.doi.org/10.1186/s13195-021-00910-8
_version_ 1784596925712957440
author Venkataraman, Ashwin V.
Bai, Wenjia
Whittington, Alex
Myers, James F.
Rabiner, Eugenii A.
Lingford-Hughes, Anne
Matthews, Paul M.
author_facet Venkataraman, Ashwin V.
Bai, Wenjia
Whittington, Alex
Myers, James F.
Rabiner, Eugenii A.
Lingford-Hughes, Anne
Matthews, Paul M.
author_sort Venkataraman, Ashwin V.
collection PubMed
description BACKGROUND: Amyloid-β (Aβ) PET has emerged as clinically useful for more accurate diagnosis of patients with cognitive decline. Aβ deposition is a necessary cause or response to the cellular pathology of Alzheimer’s disease (AD). Usual clinical and research interpretation of amyloid PET does not fully utilise all information regarding the spatial distribution of signal. We present a data-driven, spatially informed classifier to boost the diagnostic power of amyloid PET in AD. METHODS: Voxel-wise k-means clustering of amyloid-positive voxels was performed; clusters were mapped to brain anatomy and tested for their associations by diagnostic category and disease severity with 758 amyloid PET scans from volunteers in the AD continuum from the Alzheimer’s Disease Neuroimaging Initiative (ADNI). A machine learning approach based on this spatially constrained model using an optimised quadratic support vector machine was developed for automatic classification of scans for AD vs non-AD pathology. RESULTS: This classifier boosted the accuracy of classification of AD scans to 81% using the amyloid PET alone with an area under the curve (AUC) of 0.91 compared to other spatial methods. This increased sensitivity to detect AD by 15% and the AUC by 9% compared to the use of a composite region of interest SUVr. CONCLUSIONS: The diagnostic classification accuracy of amyloid PET was improved using an automated data-driven spatial classifier. Our classifier highlights the importance of considering the spatial variation in Aβ PET signal for optimal interpretation of scans. The algorithm now is available to be evaluated prospectively as a tool for automated clinical decision support in research settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13195-021-00910-8.
format Online
Article
Text
id pubmed-8582159
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-85821592021-11-15 Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support Venkataraman, Ashwin V. Bai, Wenjia Whittington, Alex Myers, James F. Rabiner, Eugenii A. Lingford-Hughes, Anne Matthews, Paul M. Alzheimers Res Ther Research BACKGROUND: Amyloid-β (Aβ) PET has emerged as clinically useful for more accurate diagnosis of patients with cognitive decline. Aβ deposition is a necessary cause or response to the cellular pathology of Alzheimer’s disease (AD). Usual clinical and research interpretation of amyloid PET does not fully utilise all information regarding the spatial distribution of signal. We present a data-driven, spatially informed classifier to boost the diagnostic power of amyloid PET in AD. METHODS: Voxel-wise k-means clustering of amyloid-positive voxels was performed; clusters were mapped to brain anatomy and tested for their associations by diagnostic category and disease severity with 758 amyloid PET scans from volunteers in the AD continuum from the Alzheimer’s Disease Neuroimaging Initiative (ADNI). A machine learning approach based on this spatially constrained model using an optimised quadratic support vector machine was developed for automatic classification of scans for AD vs non-AD pathology. RESULTS: This classifier boosted the accuracy of classification of AD scans to 81% using the amyloid PET alone with an area under the curve (AUC) of 0.91 compared to other spatial methods. This increased sensitivity to detect AD by 15% and the AUC by 9% compared to the use of a composite region of interest SUVr. CONCLUSIONS: The diagnostic classification accuracy of amyloid PET was improved using an automated data-driven spatial classifier. Our classifier highlights the importance of considering the spatial variation in Aβ PET signal for optimal interpretation of scans. The algorithm now is available to be evaluated prospectively as a tool for automated clinical decision support in research settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13195-021-00910-8. BioMed Central 2021-11-10 /pmc/articles/PMC8582159/ /pubmed/34758867 http://dx.doi.org/10.1186/s13195-021-00910-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Venkataraman, Ashwin V.
Bai, Wenjia
Whittington, Alex
Myers, James F.
Rabiner, Eugenii A.
Lingford-Hughes, Anne
Matthews, Paul M.
Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support
title Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support
title_full Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support
title_fullStr Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support
title_full_unstemmed Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support
title_short Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support
title_sort boosting the diagnostic power of amyloid-β pet using a data-driven spatially informed classifier for decision support
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8582159/
https://www.ncbi.nlm.nih.gov/pubmed/34758867
http://dx.doi.org/10.1186/s13195-021-00910-8
work_keys_str_mv AT venkataramanashwinv boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport
AT baiwenjia boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport
AT whittingtonalex boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport
AT myersjamesf boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport
AT rabinereugeniia boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport
AT lingfordhughesanne boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport
AT matthewspaulm boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport
AT boostingthediagnosticpowerofamyloidbpetusingadatadrivenspatiallyinformedclassifierfordecisionsupport