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Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support
BACKGROUND: Amyloid-β (Aβ) PET has emerged as clinically useful for more accurate diagnosis of patients with cognitive decline. Aβ deposition is a necessary cause or response to the cellular pathology of Alzheimer’s disease (AD). Usual clinical and research interpretation of amyloid PET does not ful...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8582159/ https://www.ncbi.nlm.nih.gov/pubmed/34758867 http://dx.doi.org/10.1186/s13195-021-00910-8 |
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author | Venkataraman, Ashwin V. Bai, Wenjia Whittington, Alex Myers, James F. Rabiner, Eugenii A. Lingford-Hughes, Anne Matthews, Paul M. |
author_facet | Venkataraman, Ashwin V. Bai, Wenjia Whittington, Alex Myers, James F. Rabiner, Eugenii A. Lingford-Hughes, Anne Matthews, Paul M. |
author_sort | Venkataraman, Ashwin V. |
collection | PubMed |
description | BACKGROUND: Amyloid-β (Aβ) PET has emerged as clinically useful for more accurate diagnosis of patients with cognitive decline. Aβ deposition is a necessary cause or response to the cellular pathology of Alzheimer’s disease (AD). Usual clinical and research interpretation of amyloid PET does not fully utilise all information regarding the spatial distribution of signal. We present a data-driven, spatially informed classifier to boost the diagnostic power of amyloid PET in AD. METHODS: Voxel-wise k-means clustering of amyloid-positive voxels was performed; clusters were mapped to brain anatomy and tested for their associations by diagnostic category and disease severity with 758 amyloid PET scans from volunteers in the AD continuum from the Alzheimer’s Disease Neuroimaging Initiative (ADNI). A machine learning approach based on this spatially constrained model using an optimised quadratic support vector machine was developed for automatic classification of scans for AD vs non-AD pathology. RESULTS: This classifier boosted the accuracy of classification of AD scans to 81% using the amyloid PET alone with an area under the curve (AUC) of 0.91 compared to other spatial methods. This increased sensitivity to detect AD by 15% and the AUC by 9% compared to the use of a composite region of interest SUVr. CONCLUSIONS: The diagnostic classification accuracy of amyloid PET was improved using an automated data-driven spatial classifier. Our classifier highlights the importance of considering the spatial variation in Aβ PET signal for optimal interpretation of scans. The algorithm now is available to be evaluated prospectively as a tool for automated clinical decision support in research settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13195-021-00910-8. |
format | Online Article Text |
id | pubmed-8582159 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-85821592021-11-15 Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support Venkataraman, Ashwin V. Bai, Wenjia Whittington, Alex Myers, James F. Rabiner, Eugenii A. Lingford-Hughes, Anne Matthews, Paul M. Alzheimers Res Ther Research BACKGROUND: Amyloid-β (Aβ) PET has emerged as clinically useful for more accurate diagnosis of patients with cognitive decline. Aβ deposition is a necessary cause or response to the cellular pathology of Alzheimer’s disease (AD). Usual clinical and research interpretation of amyloid PET does not fully utilise all information regarding the spatial distribution of signal. We present a data-driven, spatially informed classifier to boost the diagnostic power of amyloid PET in AD. METHODS: Voxel-wise k-means clustering of amyloid-positive voxels was performed; clusters were mapped to brain anatomy and tested for their associations by diagnostic category and disease severity with 758 amyloid PET scans from volunteers in the AD continuum from the Alzheimer’s Disease Neuroimaging Initiative (ADNI). A machine learning approach based on this spatially constrained model using an optimised quadratic support vector machine was developed for automatic classification of scans for AD vs non-AD pathology. RESULTS: This classifier boosted the accuracy of classification of AD scans to 81% using the amyloid PET alone with an area under the curve (AUC) of 0.91 compared to other spatial methods. This increased sensitivity to detect AD by 15% and the AUC by 9% compared to the use of a composite region of interest SUVr. CONCLUSIONS: The diagnostic classification accuracy of amyloid PET was improved using an automated data-driven spatial classifier. Our classifier highlights the importance of considering the spatial variation in Aβ PET signal for optimal interpretation of scans. The algorithm now is available to be evaluated prospectively as a tool for automated clinical decision support in research settings. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13195-021-00910-8. BioMed Central 2021-11-10 /pmc/articles/PMC8582159/ /pubmed/34758867 http://dx.doi.org/10.1186/s13195-021-00910-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Venkataraman, Ashwin V. Bai, Wenjia Whittington, Alex Myers, James F. Rabiner, Eugenii A. Lingford-Hughes, Anne Matthews, Paul M. Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support |
title | Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support |
title_full | Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support |
title_fullStr | Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support |
title_full_unstemmed | Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support |
title_short | Boosting the diagnostic power of amyloid-β PET using a data-driven spatially informed classifier for decision support |
title_sort | boosting the diagnostic power of amyloid-β pet using a data-driven spatially informed classifier for decision support |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8582159/ https://www.ncbi.nlm.nih.gov/pubmed/34758867 http://dx.doi.org/10.1186/s13195-021-00910-8 |
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