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Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert

Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloro...

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Autores principales: Chávez-Galarza, Julio César, Cardenas-Ninasivincha, Steffany, Contreras, Roberto, Ferro-Mauricio, Rubén, Huanca-Mamani, Wilson
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8583830/
https://www.ncbi.nlm.nih.gov/pubmed/34778557
http://dx.doi.org/10.1080/23802359.2021.1997122
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author Chávez-Galarza, Julio César
Cardenas-Ninasivincha, Steffany
Contreras, Roberto
Ferro-Mauricio, Rubén
Huanca-Mamani, Wilson
author_facet Chávez-Galarza, Julio César
Cardenas-Ninasivincha, Steffany
Contreras, Roberto
Ferro-Mauricio, Rubén
Huanca-Mamani, Wilson
author_sort Chávez-Galarza, Julio César
collection PubMed
description Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support.
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spelling pubmed-85838302021-11-12 Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert Chávez-Galarza, Julio César Cardenas-Ninasivincha, Steffany Contreras, Roberto Ferro-Mauricio, Rubén Huanca-Mamani, Wilson Mitochondrial DNA B Resour Mitogenome Announcement Tillandsia landbeckii Phil. is a vulnerable species belonging to the terrestrial Bromeliaceae family; it is highly adapted to extremely hyper-arid conditions of the Atacama Desert and Peruvian deserts. In this study, we sequenced, assembled, and annotated its chloroplast genome. T. landbeckii chloroplast genome is 159,131 bp in length, containing a large single-copy region of 87,164 bp, a small single-copy region of 18,521 bp, and a pair of inverted repeat regions of 26,723 bp. The GC content of the chloroplast genome is 37.33%. It encodes a total of 132 genes, including 86 protein-coding genes, 38 tRNA genes and 8 rRNA genes. The phylogenetic tree indicates that T. landbeckii is placed within the Bromeliaceae family and has a close relationship with T. marconae with 100% support. Taylor & Francis 2021-11-10 /pmc/articles/PMC8583830/ /pubmed/34778557 http://dx.doi.org/10.1080/23802359.2021.1997122 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chávez-Galarza, Julio César
Cardenas-Ninasivincha, Steffany
Contreras, Roberto
Ferro-Mauricio, Rubén
Huanca-Mamani, Wilson
Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_full Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_fullStr Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_full_unstemmed Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_short Chloroplast genome of Tillandsia landbeckii Phil. (Bromeliaceae) a species adapted to the hyper-arid conditions of the Atacama and Peruvian desert
title_sort chloroplast genome of tillandsia landbeckii phil. (bromeliaceae) a species adapted to the hyper-arid conditions of the atacama and peruvian desert
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8583830/
https://www.ncbi.nlm.nih.gov/pubmed/34778557
http://dx.doi.org/10.1080/23802359.2021.1997122
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