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Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas
Soil salinity is a serious environmental issue in arid China. Halophytes show extreme salt tolerance and are grow in saline-alkaline environments. There rhizosphere have complex bacterial communities, which mediate a variety of interactions between plants and soil. High-throughput sequencing was use...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Public Library of Science
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8584676/ https://www.ncbi.nlm.nih.gov/pubmed/34762689 http://dx.doi.org/10.1371/journal.pone.0259515 |
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author | Yin, Fating Zhang, Fenghua Wang, Haoran |
author_facet | Yin, Fating Zhang, Fenghua Wang, Haoran |
author_sort | Yin, Fating |
collection | PubMed |
description | Soil salinity is a serious environmental issue in arid China. Halophytes show extreme salt tolerance and are grow in saline-alkaline environments. There rhizosphere have complex bacterial communities, which mediate a variety of interactions between plants and soil. High-throughput sequencing was used to investigated rhizosphere bacterial community changes under the typical halophyte species in arid China. Three typical halophytes were Leymus chinensis (LC), Puccinellia tenuiflora (PT), Suaeda glauca (SG). The dominant phyla were Proteobacteria, Actinobacteria, Chloroflexi, Gemmatimonadetes, Acidobacteria and Bacteroidetes, Suaeda glauca rhizosphere has stronger enrichment of Nitrospirae and Cyanobacteria. The Ace, Chao and Shannon indices were significantly higher in soils under LC and SG (P<0.05). Functional predictions, based on 16S rRNA gene by PICRUSt, indicated that Energy metabolism, Amino acid metabolism, Carbohydrate metabolism and Fatty acid metabolism are dominant bacterial functions in three halophytes rhizosphere soil. Carbon metabolism, Oxidative phosphorylation, Methane metabolism, Sulfur metabolism and Nitrogen metabolism in SG were significantly higher than that in LC and PT. Regression analysis revealed that rhizosphere soil bacterial community structure is influenced by soil organic matter (SOM) and soil water content (SWC), while soil bacterial community diversity is affected by soil pH. This study contributes to our understanding of the distribution characteristics and metabolic functions under different halophyte rhizosphere bacterial communities, and will provide references for the use of rhizosphere bacteria to regulate the growth of halophytes and ecological restoration of saline soil. |
format | Online Article Text |
id | pubmed-8584676 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-85846762021-11-12 Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas Yin, Fating Zhang, Fenghua Wang, Haoran PLoS One Research Article Soil salinity is a serious environmental issue in arid China. Halophytes show extreme salt tolerance and are grow in saline-alkaline environments. There rhizosphere have complex bacterial communities, which mediate a variety of interactions between plants and soil. High-throughput sequencing was used to investigated rhizosphere bacterial community changes under the typical halophyte species in arid China. Three typical halophytes were Leymus chinensis (LC), Puccinellia tenuiflora (PT), Suaeda glauca (SG). The dominant phyla were Proteobacteria, Actinobacteria, Chloroflexi, Gemmatimonadetes, Acidobacteria and Bacteroidetes, Suaeda glauca rhizosphere has stronger enrichment of Nitrospirae and Cyanobacteria. The Ace, Chao and Shannon indices were significantly higher in soils under LC and SG (P<0.05). Functional predictions, based on 16S rRNA gene by PICRUSt, indicated that Energy metabolism, Amino acid metabolism, Carbohydrate metabolism and Fatty acid metabolism are dominant bacterial functions in three halophytes rhizosphere soil. Carbon metabolism, Oxidative phosphorylation, Methane metabolism, Sulfur metabolism and Nitrogen metabolism in SG were significantly higher than that in LC and PT. Regression analysis revealed that rhizosphere soil bacterial community structure is influenced by soil organic matter (SOM) and soil water content (SWC), while soil bacterial community diversity is affected by soil pH. This study contributes to our understanding of the distribution characteristics and metabolic functions under different halophyte rhizosphere bacterial communities, and will provide references for the use of rhizosphere bacteria to regulate the growth of halophytes and ecological restoration of saline soil. Public Library of Science 2021-11-11 /pmc/articles/PMC8584676/ /pubmed/34762689 http://dx.doi.org/10.1371/journal.pone.0259515 Text en © 2021 Yin et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Yin, Fating Zhang, Fenghua Wang, Haoran Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas |
title | Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas |
title_full | Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas |
title_fullStr | Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas |
title_full_unstemmed | Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas |
title_short | Rhizosphere bacteria community and functions under typical natural halophyte communities in North China salinized areas |
title_sort | rhizosphere bacteria community and functions under typical natural halophyte communities in north china salinized areas |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8584676/ https://www.ncbi.nlm.nih.gov/pubmed/34762689 http://dx.doi.org/10.1371/journal.pone.0259515 |
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