Cargando…
LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma
Melanoma is a fatal skin malignant tumor with a poor prognosis. We found that long noncoding RNA BASP1 ‐AS1 is essential for the development and prognosis of melanoma. The methylation, RNA sequencing, copy number variation, mutation data, and sample follow‐up information of melanoma from The Cancer...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8586662/ https://www.ncbi.nlm.nih.gov/pubmed/34533860 http://dx.doi.org/10.1111/cas.15140 |
_version_ | 1784597937516445696 |
---|---|
author | Li, YaLing Gao, YaLi Niu, XueLi Tang, MingSui Li, JingYi Song, Bing Guan, XiuHao |
author_facet | Li, YaLing Gao, YaLi Niu, XueLi Tang, MingSui Li, JingYi Song, Bing Guan, XiuHao |
author_sort | Li, YaLing |
collection | PubMed |
description | Melanoma is a fatal skin malignant tumor with a poor prognosis. We found that long noncoding RNA BASP1 ‐AS1 is essential for the development and prognosis of melanoma. The methylation, RNA sequencing, copy number variation, mutation data, and sample follow‐up information of melanoma from The Cancer Genome Atlas (TCGA) were analyzed using weighted gene co‐expression network analysis and 366 samples common to the three omics were selected for multigroup clustering analysis. A four‐gene prognostic model (BASP1‐AS1, LOC100506098, ARHGAP27P1, and LINC01532) was constructed in the TCGA cohort and validated using the GSE65904 series. The expression of BASP1‐AS1 was upregulated in melanoma tissues and various melanoma cell lines. Functionally, the ectopic expression of BASP1‐AS1 promoted cell proliferation, migration, and invasion in both A375 and SK‐MEL‐2 cells. Mechanically, BASP1‐AS1 interacted with YBX1 and recruited it to the promoter of NOTCH3, initiating its transcription process. The activation of the Notch signaling then resulted in the transcription of multiple oncogenes, including c‐MYC, PCNA, and CDK4, which contributed to melanoma progression. Thus, BASP1‐AS1 could act as a potential biomarker for cutaneous malignant melanoma. |
format | Online Article Text |
id | pubmed-8586662 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85866622021-11-18 LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma Li, YaLing Gao, YaLi Niu, XueLi Tang, MingSui Li, JingYi Song, Bing Guan, XiuHao Cancer Sci Original Articles Melanoma is a fatal skin malignant tumor with a poor prognosis. We found that long noncoding RNA BASP1 ‐AS1 is essential for the development and prognosis of melanoma. The methylation, RNA sequencing, copy number variation, mutation data, and sample follow‐up information of melanoma from The Cancer Genome Atlas (TCGA) were analyzed using weighted gene co‐expression network analysis and 366 samples common to the three omics were selected for multigroup clustering analysis. A four‐gene prognostic model (BASP1‐AS1, LOC100506098, ARHGAP27P1, and LINC01532) was constructed in the TCGA cohort and validated using the GSE65904 series. The expression of BASP1‐AS1 was upregulated in melanoma tissues and various melanoma cell lines. Functionally, the ectopic expression of BASP1‐AS1 promoted cell proliferation, migration, and invasion in both A375 and SK‐MEL‐2 cells. Mechanically, BASP1‐AS1 interacted with YBX1 and recruited it to the promoter of NOTCH3, initiating its transcription process. The activation of the Notch signaling then resulted in the transcription of multiple oncogenes, including c‐MYC, PCNA, and CDK4, which contributed to melanoma progression. Thus, BASP1‐AS1 could act as a potential biomarker for cutaneous malignant melanoma. John Wiley and Sons Inc. 2021-09-29 2021-11 /pmc/articles/PMC8586662/ /pubmed/34533860 http://dx.doi.org/10.1111/cas.15140 Text en © 2021 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Original Articles Li, YaLing Gao, YaLi Niu, XueLi Tang, MingSui Li, JingYi Song, Bing Guan, XiuHao LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma |
title | LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma |
title_full | LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma |
title_fullStr | LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma |
title_full_unstemmed | LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma |
title_short | LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma |
title_sort | lncrna basp1‐as1 interacts with ybx1 to regulate notch transcription and drives the malignancy of melanoma |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8586662/ https://www.ncbi.nlm.nih.gov/pubmed/34533860 http://dx.doi.org/10.1111/cas.15140 |
work_keys_str_mv | AT liyaling lncrnabasp1as1interactswithybx1toregulatenotchtranscriptionanddrivesthemalignancyofmelanoma AT gaoyali lncrnabasp1as1interactswithybx1toregulatenotchtranscriptionanddrivesthemalignancyofmelanoma AT niuxueli lncrnabasp1as1interactswithybx1toregulatenotchtranscriptionanddrivesthemalignancyofmelanoma AT tangmingsui lncrnabasp1as1interactswithybx1toregulatenotchtranscriptionanddrivesthemalignancyofmelanoma AT lijingyi lncrnabasp1as1interactswithybx1toregulatenotchtranscriptionanddrivesthemalignancyofmelanoma AT songbing lncrnabasp1as1interactswithybx1toregulatenotchtranscriptionanddrivesthemalignancyofmelanoma AT guanxiuhao lncrnabasp1as1interactswithybx1toregulatenotchtranscriptionanddrivesthemalignancyofmelanoma |