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LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma

Melanoma is a fatal skin malignant tumor with a poor prognosis. We found that long noncoding RNA BASP1 ‐AS1 is essential for the development and prognosis of melanoma. The methylation, RNA sequencing, copy number variation, mutation data, and sample follow‐up information of melanoma from The Cancer...

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Autores principales: Li, YaLing, Gao, YaLi, Niu, XueLi, Tang, MingSui, Li, JingYi, Song, Bing, Guan, XiuHao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8586662/
https://www.ncbi.nlm.nih.gov/pubmed/34533860
http://dx.doi.org/10.1111/cas.15140
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author Li, YaLing
Gao, YaLi
Niu, XueLi
Tang, MingSui
Li, JingYi
Song, Bing
Guan, XiuHao
author_facet Li, YaLing
Gao, YaLi
Niu, XueLi
Tang, MingSui
Li, JingYi
Song, Bing
Guan, XiuHao
author_sort Li, YaLing
collection PubMed
description Melanoma is a fatal skin malignant tumor with a poor prognosis. We found that long noncoding RNA BASP1 ‐AS1 is essential for the development and prognosis of melanoma. The methylation, RNA sequencing, copy number variation, mutation data, and sample follow‐up information of melanoma from The Cancer Genome Atlas (TCGA) were analyzed using weighted gene co‐expression network analysis and 366 samples common to the three omics were selected for multigroup clustering analysis. A four‐gene prognostic model (BASP1‐AS1, LOC100506098, ARHGAP27P1, and LINC01532) was constructed in the TCGA cohort and validated using the GSE65904 series. The expression of BASP1‐AS1 was upregulated in melanoma tissues and various melanoma cell lines. Functionally, the ectopic expression of BASP1‐AS1 promoted cell proliferation, migration, and invasion in both A375 and SK‐MEL‐2 cells. Mechanically, BASP1‐AS1 interacted with YBX1 and recruited it to the promoter of NOTCH3, initiating its transcription process. The activation of the Notch signaling then resulted in the transcription of multiple oncogenes, including c‐MYC, PCNA, and CDK4, which contributed to melanoma progression. Thus, BASP1‐AS1 could act as a potential biomarker for cutaneous malignant melanoma.
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spelling pubmed-85866622021-11-18 LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma Li, YaLing Gao, YaLi Niu, XueLi Tang, MingSui Li, JingYi Song, Bing Guan, XiuHao Cancer Sci Original Articles Melanoma is a fatal skin malignant tumor with a poor prognosis. We found that long noncoding RNA BASP1 ‐AS1 is essential for the development and prognosis of melanoma. The methylation, RNA sequencing, copy number variation, mutation data, and sample follow‐up information of melanoma from The Cancer Genome Atlas (TCGA) were analyzed using weighted gene co‐expression network analysis and 366 samples common to the three omics were selected for multigroup clustering analysis. A four‐gene prognostic model (BASP1‐AS1, LOC100506098, ARHGAP27P1, and LINC01532) was constructed in the TCGA cohort and validated using the GSE65904 series. The expression of BASP1‐AS1 was upregulated in melanoma tissues and various melanoma cell lines. Functionally, the ectopic expression of BASP1‐AS1 promoted cell proliferation, migration, and invasion in both A375 and SK‐MEL‐2 cells. Mechanically, BASP1‐AS1 interacted with YBX1 and recruited it to the promoter of NOTCH3, initiating its transcription process. The activation of the Notch signaling then resulted in the transcription of multiple oncogenes, including c‐MYC, PCNA, and CDK4, which contributed to melanoma progression. Thus, BASP1‐AS1 could act as a potential biomarker for cutaneous malignant melanoma. John Wiley and Sons Inc. 2021-09-29 2021-11 /pmc/articles/PMC8586662/ /pubmed/34533860 http://dx.doi.org/10.1111/cas.15140 Text en © 2021 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Li, YaLing
Gao, YaLi
Niu, XueLi
Tang, MingSui
Li, JingYi
Song, Bing
Guan, XiuHao
LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma
title LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma
title_full LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma
title_fullStr LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma
title_full_unstemmed LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma
title_short LncRNA BASP1‐AS1 interacts with YBX1 to regulate Notch transcription and drives the malignancy of melanoma
title_sort lncrna basp1‐as1 interacts with ybx1 to regulate notch transcription and drives the malignancy of melanoma
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8586662/
https://www.ncbi.nlm.nih.gov/pubmed/34533860
http://dx.doi.org/10.1111/cas.15140
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