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Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions

Tight coordination between transcription and translation has long been recognized as the hallmark of gene expression in bacteria. In Escherichia coli cells, disruption of the transcription-translation coordination leads to the loss of transcription processivity via triggering Rho-mediated premature...

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Autores principales: Zhu, Manlu, Mu, Haoyan, Han, Fei, Wang, Qian, Dai, Xiongfeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8586808/
https://www.ncbi.nlm.nih.gov/pubmed/34805793
http://dx.doi.org/10.1016/j.isci.2021.103333
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author Zhu, Manlu
Mu, Haoyan
Han, Fei
Wang, Qian
Dai, Xiongfeng
author_facet Zhu, Manlu
Mu, Haoyan
Han, Fei
Wang, Qian
Dai, Xiongfeng
author_sort Zhu, Manlu
collection PubMed
description Tight coordination between transcription and translation has long been recognized as the hallmark of gene expression in bacteria. In Escherichia coli cells, disruption of the transcription-translation coordination leads to the loss of transcription processivity via triggering Rho-mediated premature transcription termination. Here we quantitatively characterize the transcription and translation kinetics in Gram-positive model bacterium Bacillus subtilis. We found that the speed of transcription elongation is much faster than that of translation elongation in B. subtilis under various growth conditions. Moreover, a Rho-independent loss of transcription processivity occurs constitutively in several genes/operons but is not subject to translational control. When the transcription elongation is decelerated under poor nutrients, low temperature, or nucleotide depletion, the loss of transcription processivity is strongly enhanced, suggesting that its degree is modulated by the speed of transcription elongation. Our study reveals distinct design principles of gene expression in E. coli and B. subtilis.
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spelling pubmed-85868082021-11-19 Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions Zhu, Manlu Mu, Haoyan Han, Fei Wang, Qian Dai, Xiongfeng iScience Article Tight coordination between transcription and translation has long been recognized as the hallmark of gene expression in bacteria. In Escherichia coli cells, disruption of the transcription-translation coordination leads to the loss of transcription processivity via triggering Rho-mediated premature transcription termination. Here we quantitatively characterize the transcription and translation kinetics in Gram-positive model bacterium Bacillus subtilis. We found that the speed of transcription elongation is much faster than that of translation elongation in B. subtilis under various growth conditions. Moreover, a Rho-independent loss of transcription processivity occurs constitutively in several genes/operons but is not subject to translational control. When the transcription elongation is decelerated under poor nutrients, low temperature, or nucleotide depletion, the loss of transcription processivity is strongly enhanced, suggesting that its degree is modulated by the speed of transcription elongation. Our study reveals distinct design principles of gene expression in E. coli and B. subtilis. Elsevier 2021-10-23 /pmc/articles/PMC8586808/ /pubmed/34805793 http://dx.doi.org/10.1016/j.isci.2021.103333 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Zhu, Manlu
Mu, Haoyan
Han, Fei
Wang, Qian
Dai, Xiongfeng
Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions
title Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions
title_full Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions
title_fullStr Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions
title_full_unstemmed Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions
title_short Quantitative analysis of asynchronous transcription-translation and transcription processivity in Bacillus subtilis under various growth conditions
title_sort quantitative analysis of asynchronous transcription-translation and transcription processivity in bacillus subtilis under various growth conditions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8586808/
https://www.ncbi.nlm.nih.gov/pubmed/34805793
http://dx.doi.org/10.1016/j.isci.2021.103333
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