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Insights into Broad-Specificity Starch Modification from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB
[Image: see text] GtfB-type α-glucanotransferase enzymes from glycoside hydrolase family 70 (GH70) convert starch substrates into α-glucans that are of interest as food ingredients with a low glycemic index. Characterization of several GtfBs showed that they differ in product- and substrate specific...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8587608/ https://www.ncbi.nlm.nih.gov/pubmed/34708648 http://dx.doi.org/10.1021/acs.jafc.1c05657 |
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author | Pijning, Tjaard Gangoiti, Joana te Poele, Evelien M. Börner, Tim Dijkhuizen, Lubbert |
author_facet | Pijning, Tjaard Gangoiti, Joana te Poele, Evelien M. Börner, Tim Dijkhuizen, Lubbert |
author_sort | Pijning, Tjaard |
collection | PubMed |
description | [Image: see text] GtfB-type α-glucanotransferase enzymes from glycoside hydrolase family 70 (GH70) convert starch substrates into α-glucans that are of interest as food ingredients with a low glycemic index. Characterization of several GtfBs showed that they differ in product- and substrate specificity, especially with regard to branching, but structural information is limited to a single GtfB, preferring mostly linear starches and featuring a tunneled binding groove. Here, we present the second crystal structure of a 4,6-α-glucanotransferase (Limosilactobacillus reuteri NCC 2613) and an improved homology model of a 4,3-α-glucanotransferase GtfB (L. fermentum NCC 2970) and show that they are able to convert both linear and branched starch substrates. Compared to the previously described GtfB structure, these two enzymes feature a much more open binding groove, reminiscent of and evolutionary closer to starch-converting GH13 α-amylases. Sequence analysis of 287 putative GtfBs suggests that only 20% of them are similarly “open” and thus suitable as broad-specificity starch-converting enzymes. |
format | Online Article Text |
id | pubmed-8587608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-85876082021-11-12 Insights into Broad-Specificity Starch Modification from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB Pijning, Tjaard Gangoiti, Joana te Poele, Evelien M. Börner, Tim Dijkhuizen, Lubbert J Agric Food Chem [Image: see text] GtfB-type α-glucanotransferase enzymes from glycoside hydrolase family 70 (GH70) convert starch substrates into α-glucans that are of interest as food ingredients with a low glycemic index. Characterization of several GtfBs showed that they differ in product- and substrate specificity, especially with regard to branching, but structural information is limited to a single GtfB, preferring mostly linear starches and featuring a tunneled binding groove. Here, we present the second crystal structure of a 4,6-α-glucanotransferase (Limosilactobacillus reuteri NCC 2613) and an improved homology model of a 4,3-α-glucanotransferase GtfB (L. fermentum NCC 2970) and show that they are able to convert both linear and branched starch substrates. Compared to the previously described GtfB structure, these two enzymes feature a much more open binding groove, reminiscent of and evolutionary closer to starch-converting GH13 α-amylases. Sequence analysis of 287 putative GtfBs suggests that only 20% of them are similarly “open” and thus suitable as broad-specificity starch-converting enzymes. American Chemical Society 2021-10-28 2021-11-10 /pmc/articles/PMC8587608/ /pubmed/34708648 http://dx.doi.org/10.1021/acs.jafc.1c05657 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Pijning, Tjaard Gangoiti, Joana te Poele, Evelien M. Börner, Tim Dijkhuizen, Lubbert Insights into Broad-Specificity Starch Modification from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB |
title | Insights into Broad-Specificity Starch Modification
from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB |
title_full | Insights into Broad-Specificity Starch Modification
from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB |
title_fullStr | Insights into Broad-Specificity Starch Modification
from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB |
title_full_unstemmed | Insights into Broad-Specificity Starch Modification
from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB |
title_short | Insights into Broad-Specificity Starch Modification
from the Crystal Structure of Limosilactobacillus Reuteri NCC 2613 4,6-α-Glucanotransferase GtfB |
title_sort | insights into broad-specificity starch modification
from the crystal structure of limosilactobacillus reuteri ncc 2613 4,6-α-glucanotransferase gtfb |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8587608/ https://www.ncbi.nlm.nih.gov/pubmed/34708648 http://dx.doi.org/10.1021/acs.jafc.1c05657 |
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