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Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration

Patch-based medical image registration has been well explored in recent decades. However, the patch fusion process can generate grid-like artifacts along the edge of patches for the following two reasons: firstly, in order to ensure the same size of input and output, zero-padding is used, which caus...

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Detalles Bibliográficos
Autores principales: Wu, Liang, Hu, Shunbo, Liu, Changchun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8588231/
https://www.ncbi.nlm.nih.gov/pubmed/34770418
http://dx.doi.org/10.3390/s21217112
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author Wu, Liang
Hu, Shunbo
Liu, Changchun
author_facet Wu, Liang
Hu, Shunbo
Liu, Changchun
author_sort Wu, Liang
collection PubMed
description Patch-based medical image registration has been well explored in recent decades. However, the patch fusion process can generate grid-like artifacts along the edge of patches for the following two reasons: firstly, in order to ensure the same size of input and output, zero-padding is used, which causes uncertainty in the edges of the output feature map during the feature extraction process; secondly, the sliding window extraction patch with different strides will result in different degrees of grid-like artifacts. In this paper, we propose an exponential-distance-weighted (EDW) method to remove grid-like artifacts. To consider the uncertainty of predictions near patch edges, we used an exponential function to convert the distance from the point in the overlapping regions to the center point of the patch into a weighting coefficient. This gave lower weights to areas near the patch edges, to decrease the uncertainty predictions. Finally, the dense displacement field was obtained by this EDW weighting method. We used the OASIS-3 dataset to evaluate the performance of our method. The experimental results show that the proposed EDW patch fusion method removed grid-like artifacts and improved the dice similarity coefficient superior to those of several state-of-the-art methods. The proposed fusion method can be used together with any patch-based registration model.
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spelling pubmed-85882312021-11-13 Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration Wu, Liang Hu, Shunbo Liu, Changchun Sensors (Basel) Article Patch-based medical image registration has been well explored in recent decades. However, the patch fusion process can generate grid-like artifacts along the edge of patches for the following two reasons: firstly, in order to ensure the same size of input and output, zero-padding is used, which causes uncertainty in the edges of the output feature map during the feature extraction process; secondly, the sliding window extraction patch with different strides will result in different degrees of grid-like artifacts. In this paper, we propose an exponential-distance-weighted (EDW) method to remove grid-like artifacts. To consider the uncertainty of predictions near patch edges, we used an exponential function to convert the distance from the point in the overlapping regions to the center point of the patch into a weighting coefficient. This gave lower weights to areas near the patch edges, to decrease the uncertainty predictions. Finally, the dense displacement field was obtained by this EDW weighting method. We used the OASIS-3 dataset to evaluate the performance of our method. The experimental results show that the proposed EDW patch fusion method removed grid-like artifacts and improved the dice similarity coefficient superior to those of several state-of-the-art methods. The proposed fusion method can be used together with any patch-based registration model. MDPI 2021-10-26 /pmc/articles/PMC8588231/ /pubmed/34770418 http://dx.doi.org/10.3390/s21217112 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wu, Liang
Hu, Shunbo
Liu, Changchun
Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration
title Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration
title_full Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration
title_fullStr Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration
title_full_unstemmed Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration
title_short Exponential-Distance Weights for Reducing Grid-like Artifacts in Patch-Based Medical Image Registration
title_sort exponential-distance weights for reducing grid-like artifacts in patch-based medical image registration
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8588231/
https://www.ncbi.nlm.nih.gov/pubmed/34770418
http://dx.doi.org/10.3390/s21217112
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