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Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage

DNA has been considered as a compelling candidate for digital data storage due to advantages such as high coding density, long retention time, and low energy consumption. Despite many works reported, the development of a DNA-based database of full integration, high efficiency, and practical applicab...

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Autores principales: Xu, Chengtao, Ma, Biao, Gao, Zhongli, Dong, Xing, Zhao, Chao, Liu, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Association for the Advancement of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8589306/
https://www.ncbi.nlm.nih.gov/pubmed/34767438
http://dx.doi.org/10.1126/sciadv.abk0100
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author Xu, Chengtao
Ma, Biao
Gao, Zhongli
Dong, Xing
Zhao, Chao
Liu, Hong
author_facet Xu, Chengtao
Ma, Biao
Gao, Zhongli
Dong, Xing
Zhao, Chao
Liu, Hong
author_sort Xu, Chengtao
collection PubMed
description DNA has been considered as a compelling candidate for digital data storage due to advantages such as high coding density, long retention time, and low energy consumption. Despite many works reported, the development of a DNA-based database of full integration, high efficiency, and practical applicability is still challenging. In this work, we report the synthesis and sequencing of DNA on a single electrode with scalability for an integrated DNA-based data storage system. The synthesis of DNA is based on phosphoramidite chemistry and electrochemical deprotection. The sequencing relies on charge redistribution originated from polymerase-catalyzed primer extension, leading to a measurable current spike. By regeneration of the electrode after sequencing, repeated sequencing can be achieved to improve the accuracy. A SlipChip device is developed to simplify the liquid introduction involved in DNA synthesis and sequencing. As the proof-of-concept experiment, text information is stored in the system and then accurately retrieved.
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spelling pubmed-85893062021-11-18 Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage Xu, Chengtao Ma, Biao Gao, Zhongli Dong, Xing Zhao, Chao Liu, Hong Sci Adv Physical and Materials Sciences DNA has been considered as a compelling candidate for digital data storage due to advantages such as high coding density, long retention time, and low energy consumption. Despite many works reported, the development of a DNA-based database of full integration, high efficiency, and practical applicability is still challenging. In this work, we report the synthesis and sequencing of DNA on a single electrode with scalability for an integrated DNA-based data storage system. The synthesis of DNA is based on phosphoramidite chemistry and electrochemical deprotection. The sequencing relies on charge redistribution originated from polymerase-catalyzed primer extension, leading to a measurable current spike. By regeneration of the electrode after sequencing, repeated sequencing can be achieved to improve the accuracy. A SlipChip device is developed to simplify the liquid introduction involved in DNA synthesis and sequencing. As the proof-of-concept experiment, text information is stored in the system and then accurately retrieved. American Association for the Advancement of Science 2021-11-12 /pmc/articles/PMC8589306/ /pubmed/34767438 http://dx.doi.org/10.1126/sciadv.abk0100 Text en Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC). https://creativecommons.org/licenses/by-nc/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license (https://creativecommons.org/licenses/by-nc/4.0/) , which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.
spellingShingle Physical and Materials Sciences
Xu, Chengtao
Ma, Biao
Gao, Zhongli
Dong, Xing
Zhao, Chao
Liu, Hong
Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage
title Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage
title_full Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage
title_fullStr Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage
title_full_unstemmed Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage
title_short Electrochemical DNA synthesis and sequencing on a single electrode with scalability for integrated data storage
title_sort electrochemical dna synthesis and sequencing on a single electrode with scalability for integrated data storage
topic Physical and Materials Sciences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8589306/
https://www.ncbi.nlm.nih.gov/pubmed/34767438
http://dx.doi.org/10.1126/sciadv.abk0100
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