Cargando…

The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer

Tumor microenvironment (TME) has been demonstrated to exhibit a regulatory effect on the progressions of gastric cancer (GC). However, the related functions of stromal and immune components (TME-associated genes) in TME remain largely unclear. From the TCGA dataset, we downloaded the clinical data o...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Yang, Li, Jia-qi, Jiang, Hai-ping, Li, Xin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8589478/
https://www.ncbi.nlm.nih.gov/pubmed/34777633
http://dx.doi.org/10.1155/2021/5669635
_version_ 1784598729220685824
author Li, Yang
Li, Jia-qi
Jiang, Hai-ping
Li, Xin
author_facet Li, Yang
Li, Jia-qi
Jiang, Hai-ping
Li, Xin
author_sort Li, Yang
collection PubMed
description Tumor microenvironment (TME) has been demonstrated to exhibit a regulatory effect on the progressions of gastric cancer (GC). However, the related functions of stromal and immune components (TME-associated genes) in TME remain largely unclear. From the TCGA dataset, we downloaded the clinical data of 375 GC cases and then estimated the percentage of tumor-infiltrating immunocytes (TICs) and the levels of immune and stromal constituents by the use of CIBERSORT and ESTIMATE tolls. Univariate assays were applied to study the differentially expressed genes. The associations between the clinical information of GC patients and the expressions of the specific genes were analyzed based on the TCGA datasets. The effect of Plexin domain containing 2 (PLXDC2) expression on TICs was conducted. We observed that PLXDC2 expression was distinctly upregulated in GC specimens compared with nontumor gastric specimens. Its upregulation was associated with advanced clinical stages and predicted a shorter overall survival of GC patients. The genes in the group of higher expressing PLXDC2 were primarily enriched in immunity-associated events. By the use of CIBERSORT, we observed that PLXDC2 expressions were related to the proportion of dendritic cells resting, T cell CD4 memory resting, eosinophils, mastocyte resting, mononuclear cells, plasma cells, T cell follicle helper, macrophage M2, and dendritic cells activated. Overall, our discoveries revealed that the expression of PLXDC2 was remarkable in GC, might be a possible biomarker for GC, and provided novel contents regarding immune infiltrates, offering novel insight for treatments of GC.
format Online
Article
Text
id pubmed-8589478
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-85894782021-11-13 The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer Li, Yang Li, Jia-qi Jiang, Hai-ping Li, Xin Dis Markers Research Article Tumor microenvironment (TME) has been demonstrated to exhibit a regulatory effect on the progressions of gastric cancer (GC). However, the related functions of stromal and immune components (TME-associated genes) in TME remain largely unclear. From the TCGA dataset, we downloaded the clinical data of 375 GC cases and then estimated the percentage of tumor-infiltrating immunocytes (TICs) and the levels of immune and stromal constituents by the use of CIBERSORT and ESTIMATE tolls. Univariate assays were applied to study the differentially expressed genes. The associations between the clinical information of GC patients and the expressions of the specific genes were analyzed based on the TCGA datasets. The effect of Plexin domain containing 2 (PLXDC2) expression on TICs was conducted. We observed that PLXDC2 expression was distinctly upregulated in GC specimens compared with nontumor gastric specimens. Its upregulation was associated with advanced clinical stages and predicted a shorter overall survival of GC patients. The genes in the group of higher expressing PLXDC2 were primarily enriched in immunity-associated events. By the use of CIBERSORT, we observed that PLXDC2 expressions were related to the proportion of dendritic cells resting, T cell CD4 memory resting, eosinophils, mastocyte resting, mononuclear cells, plasma cells, T cell follicle helper, macrophage M2, and dendritic cells activated. Overall, our discoveries revealed that the expression of PLXDC2 was remarkable in GC, might be a possible biomarker for GC, and provided novel contents regarding immune infiltrates, offering novel insight for treatments of GC. Hindawi 2021-11-05 /pmc/articles/PMC8589478/ /pubmed/34777633 http://dx.doi.org/10.1155/2021/5669635 Text en Copyright © 2021 Yang Li et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Li, Yang
Li, Jia-qi
Jiang, Hai-ping
Li, Xin
The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer
title The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer
title_full The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer
title_fullStr The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer
title_full_unstemmed The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer
title_short The Upregulation of PLXDC2 Correlates with Immune Microenvironment Characteristics and Predicts Prognosis in Gastric Cancer
title_sort upregulation of plxdc2 correlates with immune microenvironment characteristics and predicts prognosis in gastric cancer
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8589478/
https://www.ncbi.nlm.nih.gov/pubmed/34777633
http://dx.doi.org/10.1155/2021/5669635
work_keys_str_mv AT liyang theupregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer
AT lijiaqi theupregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer
AT jianghaiping theupregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer
AT lixin theupregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer
AT liyang upregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer
AT lijiaqi upregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer
AT jianghaiping upregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer
AT lixin upregulationofplxdc2correlateswithimmunemicroenvironmentcharacteristicsandpredictsprognosisingastriccancer