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Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification
The article analyzes experimentally and theoretically the influence of microscope parameters on the pinhole-assisted Raman depth profiles in uniform and composite refractive media. The main objective is the reliable mapping of deep sample regions. The easiest to interpret results are found with low...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8589783/ https://www.ncbi.nlm.nih.gov/pubmed/34599394 http://dx.doi.org/10.1007/s00216-021-03678-w |
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author | Boldrini, Barbara Ostertag, Edwin Rebner, Karsten Oelkrug, Dieter |
author_facet | Boldrini, Barbara Ostertag, Edwin Rebner, Karsten Oelkrug, Dieter |
author_sort | Boldrini, Barbara |
collection | PubMed |
description | The article analyzes experimentally and theoretically the influence of microscope parameters on the pinhole-assisted Raman depth profiles in uniform and composite refractive media. The main objective is the reliable mapping of deep sample regions. The easiest to interpret results are found with low magnification, low aperture, and small pinholes. Here, the intensities and shapes of the Raman signals are independent of the location of the emitter relative to the sample surface. Theoretically, the results can be well described with a simple analytical equation containing the axial depth resolution of the microscope and the position of the emitter. The lower determinable object size is limited to 2–4 μm. If sub-micrometer resolution is desired, high magnification, mostly combined with high aperture, becomes necessary. The signal intensities and shapes depend now in refractive media on the position relative to the sample surface. This aspect is investigated on a number of uniform and stacked polymer layers, 2–160 μm thick, with the best available transparency. The experimental depth profiles are numerically fitted with excellent accuracy by inserting a Gaussian excitation beam of variable waist and fill fraction through the focusing lens area, and by treating the Raman emission with geometric optics as spontaneous isotropic process through the lens and the variable pinhole, respectively. The intersectional area of these two solid angles yields the leading factor in understanding confocal (pinhole-assisted) Raman depth profiles. GRAPHICAL ABSTRACT: [Figure: see text] |
format | Online Article Text |
id | pubmed-8589783 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-85897832021-11-15 Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification Boldrini, Barbara Ostertag, Edwin Rebner, Karsten Oelkrug, Dieter Anal Bioanal Chem Research Paper The article analyzes experimentally and theoretically the influence of microscope parameters on the pinhole-assisted Raman depth profiles in uniform and composite refractive media. The main objective is the reliable mapping of deep sample regions. The easiest to interpret results are found with low magnification, low aperture, and small pinholes. Here, the intensities and shapes of the Raman signals are independent of the location of the emitter relative to the sample surface. Theoretically, the results can be well described with a simple analytical equation containing the axial depth resolution of the microscope and the position of the emitter. The lower determinable object size is limited to 2–4 μm. If sub-micrometer resolution is desired, high magnification, mostly combined with high aperture, becomes necessary. The signal intensities and shapes depend now in refractive media on the position relative to the sample surface. This aspect is investigated on a number of uniform and stacked polymer layers, 2–160 μm thick, with the best available transparency. The experimental depth profiles are numerically fitted with excellent accuracy by inserting a Gaussian excitation beam of variable waist and fill fraction through the focusing lens area, and by treating the Raman emission with geometric optics as spontaneous isotropic process through the lens and the variable pinhole, respectively. The intersectional area of these two solid angles yields the leading factor in understanding confocal (pinhole-assisted) Raman depth profiles. GRAPHICAL ABSTRACT: [Figure: see text] Springer Berlin Heidelberg 2021-10-01 2021 /pmc/articles/PMC8589783/ /pubmed/34599394 http://dx.doi.org/10.1007/s00216-021-03678-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Paper Boldrini, Barbara Ostertag, Edwin Rebner, Karsten Oelkrug, Dieter Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification |
title | Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification |
title_full | Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification |
title_fullStr | Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification |
title_full_unstemmed | Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification |
title_short | Exploring the hidden depth by confocal Raman experiments with variable objective aperture and magnification |
title_sort | exploring the hidden depth by confocal raman experiments with variable objective aperture and magnification |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8589783/ https://www.ncbi.nlm.nih.gov/pubmed/34599394 http://dx.doi.org/10.1007/s00216-021-03678-w |
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