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A Novel Predictive Model Associated with Osteosarcoma Metastasis
PURPOSE: Long non-coding RNAs (lncRNAs) have diverse roles in modulating gene expression on both transcriptional and translational levels, but their involvement in osteosarcoma (OS) metastasis remains unknown. PATIENTS AND METHODS: Transcriptional and clinical data were downloaded from TARGET datase...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8590484/ https://www.ncbi.nlm.nih.gov/pubmed/34785949 http://dx.doi.org/10.2147/CMAR.S332387 |
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author | Zhang, Han Chen, Guanhong Lyu, Xiajie Rong, Chun Wang, Yingzhen Xu, Ying Lyu, Chengyu |
author_facet | Zhang, Han Chen, Guanhong Lyu, Xiajie Rong, Chun Wang, Yingzhen Xu, Ying Lyu, Chengyu |
author_sort | Zhang, Han |
collection | PubMed |
description | PURPOSE: Long non-coding RNAs (lncRNAs) have diverse roles in modulating gene expression on both transcriptional and translational levels, but their involvement in osteosarcoma (OS) metastasis remains unknown. PATIENTS AND METHODS: Transcriptional and clinical data were downloaded from TARGET datasets. A total of seven lncRNAs screened by univariate cox regression, lasso regression, and multivariate cox regression analysis were used to establish the OS metastasis model. The area under the receiver operating characteristic curve (AUC) was used to evaluate the model. RESULTS: The established model showed exceptional predictive performance (1 year: AUC = 0.92, 95% Cl = 0.83–0.99; 3 years: AUC = 0.87, 95% Cl = 0.79–0.96; 5 years: AUC = 0.86, 95% Cl = 0.76–0.96). Patients in the high group had a poor survival outcome than those in the low group (p < 0.0001). GSEA analysis revealed that “NOTCH_SIGNALING” and “WNT_BETA_CATENIN_SIGNALING” were significantly enriched and that resting dendritic cells were associated with AL512422.1, AL357507.1, and AC006033.2 (p < 0.05). CONCLUSION: Based on seven prognosis-related lncRNAs, we constructed a novel model with high reliability and accuracy for predicting metastasis in OS patients. |
format | Online Article Text |
id | pubmed-8590484 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-85904842021-11-15 A Novel Predictive Model Associated with Osteosarcoma Metastasis Zhang, Han Chen, Guanhong Lyu, Xiajie Rong, Chun Wang, Yingzhen Xu, Ying Lyu, Chengyu Cancer Manag Res Original Research PURPOSE: Long non-coding RNAs (lncRNAs) have diverse roles in modulating gene expression on both transcriptional and translational levels, but their involvement in osteosarcoma (OS) metastasis remains unknown. PATIENTS AND METHODS: Transcriptional and clinical data were downloaded from TARGET datasets. A total of seven lncRNAs screened by univariate cox regression, lasso regression, and multivariate cox regression analysis were used to establish the OS metastasis model. The area under the receiver operating characteristic curve (AUC) was used to evaluate the model. RESULTS: The established model showed exceptional predictive performance (1 year: AUC = 0.92, 95% Cl = 0.83–0.99; 3 years: AUC = 0.87, 95% Cl = 0.79–0.96; 5 years: AUC = 0.86, 95% Cl = 0.76–0.96). Patients in the high group had a poor survival outcome than those in the low group (p < 0.0001). GSEA analysis revealed that “NOTCH_SIGNALING” and “WNT_BETA_CATENIN_SIGNALING” were significantly enriched and that resting dendritic cells were associated with AL512422.1, AL357507.1, and AC006033.2 (p < 0.05). CONCLUSION: Based on seven prognosis-related lncRNAs, we constructed a novel model with high reliability and accuracy for predicting metastasis in OS patients. Dove 2021-11-09 /pmc/articles/PMC8590484/ /pubmed/34785949 http://dx.doi.org/10.2147/CMAR.S332387 Text en © 2021 Zhang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Zhang, Han Chen, Guanhong Lyu, Xiajie Rong, Chun Wang, Yingzhen Xu, Ying Lyu, Chengyu A Novel Predictive Model Associated with Osteosarcoma Metastasis |
title | A Novel Predictive Model Associated with Osteosarcoma Metastasis |
title_full | A Novel Predictive Model Associated with Osteosarcoma Metastasis |
title_fullStr | A Novel Predictive Model Associated with Osteosarcoma Metastasis |
title_full_unstemmed | A Novel Predictive Model Associated with Osteosarcoma Metastasis |
title_short | A Novel Predictive Model Associated with Osteosarcoma Metastasis |
title_sort | novel predictive model associated with osteosarcoma metastasis |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8590484/ https://www.ncbi.nlm.nih.gov/pubmed/34785949 http://dx.doi.org/10.2147/CMAR.S332387 |
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