Cargando…

The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD

Chronic obstructive pulmonary disease (COPD) is characterized by irreversible airflow obstruction and is associated with chronic local and systemic inflammation and oxidative stress. The enhanced oxidative stress and inflammation have been reported to affect telomere length (TL). Furthermore, a numb...

Descripción completa

Detalles Bibliográficos
Autores principales: Tacheva, Tanya, Zienolddiny, Shanbeh, Dimov, Dimo, Vlaykova, Denitsa, Vlaykova, Tatyana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8590800/
https://www.ncbi.nlm.nih.gov/pubmed/34824901
http://dx.doi.org/10.7717/peerj.12190
_version_ 1784599064528027648
author Tacheva, Tanya
Zienolddiny, Shanbeh
Dimov, Dimo
Vlaykova, Denitsa
Vlaykova, Tatyana
author_facet Tacheva, Tanya
Zienolddiny, Shanbeh
Dimov, Dimo
Vlaykova, Denitsa
Vlaykova, Tatyana
author_sort Tacheva, Tanya
collection PubMed
description Chronic obstructive pulmonary disease (COPD) is characterized by irreversible airflow obstruction and is associated with chronic local and systemic inflammation and oxidative stress. The enhanced oxidative stress and inflammation have been reported to affect telomere length (TL). Furthermore, a number of SNPs at loci encoding the main components of the telomerase genes, TERT and TERC have been shown to correlate with TL. We aimed to explore the leukocyte TL and genotypes for single nucleotide polymorphisms, rs12696304 (C > G) and rs10936599 (C > T) near TERC in COPD cases and matched healthy controls using q-PCR technologies. Successful assessment of TL was performed for 91 patients and 88 controls. The patients had shorter TL (17919.36 ± 1203.01 bp) compared to controls (21 271.48 ± 1891.36 bp) although not significant (p = 0.137). The TL did not associate with the gender, age, spirometric indexes, smoking habits but tended to correlate negatively with BMI (Rho = − 0.215, p = 0.076) in the controls, but not in COPD patients. The genotype frequencies of the SNPs rs12696304 and rs10936599 were compared between patients and controls and the odds ratios (OR) for developing COPD were calculated. The carriers of the common homozygous (CC) genotypes of the SNPs had higher risk for COPD, compared to carriers of the variants alleles (rs12696304 CG+GG vs. CC; OR: 0.615, 95% CI [0.424–0.894], p = 0.011 and for rs10936599 CT+TT vs. CC OR = 0.668, 95% CI [0.457–0.976], p = 0.044). Analysis on the combined effects of the TERC rs12696304 (C > G) and rs10936599 (C > T) genotypes, CC/CC genotype combination was associated with higher risk for COPD (p < 0.0001) and marginally lower FEV1% pr. in patients with GOLD II (p = 0.052). There was no association between the SNP genotypes and TL. In summary, our results suggest that COPD patients may have shorter TL, and rs12696304 and rs10936599 near TERC may affect the risk of COPD independently of TL.
format Online
Article
Text
id pubmed-8590800
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher PeerJ Inc.
record_format MEDLINE/PubMed
spelling pubmed-85908002021-11-24 The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD Tacheva, Tanya Zienolddiny, Shanbeh Dimov, Dimo Vlaykova, Denitsa Vlaykova, Tatyana PeerJ Biochemistry Chronic obstructive pulmonary disease (COPD) is characterized by irreversible airflow obstruction and is associated with chronic local and systemic inflammation and oxidative stress. The enhanced oxidative stress and inflammation have been reported to affect telomere length (TL). Furthermore, a number of SNPs at loci encoding the main components of the telomerase genes, TERT and TERC have been shown to correlate with TL. We aimed to explore the leukocyte TL and genotypes for single nucleotide polymorphisms, rs12696304 (C > G) and rs10936599 (C > T) near TERC in COPD cases and matched healthy controls using q-PCR technologies. Successful assessment of TL was performed for 91 patients and 88 controls. The patients had shorter TL (17919.36 ± 1203.01 bp) compared to controls (21 271.48 ± 1891.36 bp) although not significant (p = 0.137). The TL did not associate with the gender, age, spirometric indexes, smoking habits but tended to correlate negatively with BMI (Rho = − 0.215, p = 0.076) in the controls, but not in COPD patients. The genotype frequencies of the SNPs rs12696304 and rs10936599 were compared between patients and controls and the odds ratios (OR) for developing COPD were calculated. The carriers of the common homozygous (CC) genotypes of the SNPs had higher risk for COPD, compared to carriers of the variants alleles (rs12696304 CG+GG vs. CC; OR: 0.615, 95% CI [0.424–0.894], p = 0.011 and for rs10936599 CT+TT vs. CC OR = 0.668, 95% CI [0.457–0.976], p = 0.044). Analysis on the combined effects of the TERC rs12696304 (C > G) and rs10936599 (C > T) genotypes, CC/CC genotype combination was associated with higher risk for COPD (p < 0.0001) and marginally lower FEV1% pr. in patients with GOLD II (p = 0.052). There was no association between the SNP genotypes and TL. In summary, our results suggest that COPD patients may have shorter TL, and rs12696304 and rs10936599 near TERC may affect the risk of COPD independently of TL. PeerJ Inc. 2021-11-11 /pmc/articles/PMC8590800/ /pubmed/34824901 http://dx.doi.org/10.7717/peerj.12190 Text en ©2021 Tacheva et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Biochemistry
Tacheva, Tanya
Zienolddiny, Shanbeh
Dimov, Dimo
Vlaykova, Denitsa
Vlaykova, Tatyana
The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD
title The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD
title_full The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD
title_fullStr The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD
title_full_unstemmed The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD
title_short The leukocyte telomere length, single nucleotide polymorphisms near TERC gene and risk of COPD
title_sort leukocyte telomere length, single nucleotide polymorphisms near terc gene and risk of copd
topic Biochemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8590800/
https://www.ncbi.nlm.nih.gov/pubmed/34824901
http://dx.doi.org/10.7717/peerj.12190
work_keys_str_mv AT tachevatanya theleukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT zienolddinyshanbeh theleukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT dimovdimo theleukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT vlaykovadenitsa theleukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT vlaykovatatyana theleukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT tachevatanya leukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT zienolddinyshanbeh leukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT dimovdimo leukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT vlaykovadenitsa leukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd
AT vlaykovatatyana leukocytetelomerelengthsinglenucleotidepolymorphismsneartercgeneandriskofcopd