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Prediction of COVID-19 epidemic situation via fine-tuned IndRNN
The COVID-19 pandemic is the most serious catastrophe since the Second World War. To predict the epidemic more accurately under the influence of policies, a framework based on Independently Recurrent Neural Network (IndRNN) with fine-tuning are proposed for predict the epidemic development trend of...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8592248/ https://www.ncbi.nlm.nih.gov/pubmed/34825057 http://dx.doi.org/10.7717/peerj-cs.770 |
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author | Hong, Zhonghua Fan, Ziyang Tong, Xiaohua Zhou, Ruyan Pan, Haiyan Zhang, Yun Han, Yanling Wang, Jing Yang, Shuhu Wu, Hong Li, Jiahao |
author_facet | Hong, Zhonghua Fan, Ziyang Tong, Xiaohua Zhou, Ruyan Pan, Haiyan Zhang, Yun Han, Yanling Wang, Jing Yang, Shuhu Wu, Hong Li, Jiahao |
author_sort | Hong, Zhonghua |
collection | PubMed |
description | The COVID-19 pandemic is the most serious catastrophe since the Second World War. To predict the epidemic more accurately under the influence of policies, a framework based on Independently Recurrent Neural Network (IndRNN) with fine-tuning are proposed for predict the epidemic development trend of confirmed cases and deaths in the United Stated, India, Brazil, France, Russia, China, and the world to late May, 2021. The proposed framework consists of four main steps: data pre-processing, model pre-training and weight saving, the weight fine-tuning, trend predicting and validating. It is concluded that the proposed framework based on IndRNN and fine-tuning with high speed and low complexity, has great fitting and prediction performance. The applied fine-tuning strategy can effectively reduce the error by up to 20.94% and time cost. For most of the countries, the MAPEs of fine-tuned IndRNN model were less than 1.2%, the minimum MAPE and RMSE were 0.05%, and 1.17, respectively, by using Chinese deaths, during the testing phase. According to the prediction and validation results, the MAPEs of the proposed framework were less than 6.2% in most cases, and it generated lowest MAPE and RMSE values of 0.05% and 2.14, respectively, for deaths in China. Moreover, Policies that play an important role in the development of COVID-19 have been summarized. Timely and appropriate measures can greatly reduce the spread of COVID-19; untimely and inappropriate government policies, lax regulations, and insufficient public cooperation are the reasons for the aggravation of the epidemic situations. The code is available at https://github.com/zhhongsh/COVID19-Precdiction. And the prediction by IndRNN model with fine-tuning are now available online (http://47.117.160.245:8088/IndRNNPredict). |
format | Online Article Text |
id | pubmed-8592248 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-85922482021-11-24 Prediction of COVID-19 epidemic situation via fine-tuned IndRNN Hong, Zhonghua Fan, Ziyang Tong, Xiaohua Zhou, Ruyan Pan, Haiyan Zhang, Yun Han, Yanling Wang, Jing Yang, Shuhu Wu, Hong Li, Jiahao PeerJ Comput Sci Bioinformatics The COVID-19 pandemic is the most serious catastrophe since the Second World War. To predict the epidemic more accurately under the influence of policies, a framework based on Independently Recurrent Neural Network (IndRNN) with fine-tuning are proposed for predict the epidemic development trend of confirmed cases and deaths in the United Stated, India, Brazil, France, Russia, China, and the world to late May, 2021. The proposed framework consists of four main steps: data pre-processing, model pre-training and weight saving, the weight fine-tuning, trend predicting and validating. It is concluded that the proposed framework based on IndRNN and fine-tuning with high speed and low complexity, has great fitting and prediction performance. The applied fine-tuning strategy can effectively reduce the error by up to 20.94% and time cost. For most of the countries, the MAPEs of fine-tuned IndRNN model were less than 1.2%, the minimum MAPE and RMSE were 0.05%, and 1.17, respectively, by using Chinese deaths, during the testing phase. According to the prediction and validation results, the MAPEs of the proposed framework were less than 6.2% in most cases, and it generated lowest MAPE and RMSE values of 0.05% and 2.14, respectively, for deaths in China. Moreover, Policies that play an important role in the development of COVID-19 have been summarized. Timely and appropriate measures can greatly reduce the spread of COVID-19; untimely and inappropriate government policies, lax regulations, and insufficient public cooperation are the reasons for the aggravation of the epidemic situations. The code is available at https://github.com/zhhongsh/COVID19-Precdiction. And the prediction by IndRNN model with fine-tuning are now available online (http://47.117.160.245:8088/IndRNNPredict). PeerJ Inc. 2021-11-12 /pmc/articles/PMC8592248/ /pubmed/34825057 http://dx.doi.org/10.7717/peerj-cs.770 Text en ©2021 Hong et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ Computer Science) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Hong, Zhonghua Fan, Ziyang Tong, Xiaohua Zhou, Ruyan Pan, Haiyan Zhang, Yun Han, Yanling Wang, Jing Yang, Shuhu Wu, Hong Li, Jiahao Prediction of COVID-19 epidemic situation via fine-tuned IndRNN |
title | Prediction of COVID-19 epidemic situation via fine-tuned IndRNN |
title_full | Prediction of COVID-19 epidemic situation via fine-tuned IndRNN |
title_fullStr | Prediction of COVID-19 epidemic situation via fine-tuned IndRNN |
title_full_unstemmed | Prediction of COVID-19 epidemic situation via fine-tuned IndRNN |
title_short | Prediction of COVID-19 epidemic situation via fine-tuned IndRNN |
title_sort | prediction of covid-19 epidemic situation via fine-tuned indrnn |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8592248/ https://www.ncbi.nlm.nih.gov/pubmed/34825057 http://dx.doi.org/10.7717/peerj-cs.770 |
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