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Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis

PURPOSE: PaO(2) to FiO(2) ratio (P/F) is used to assess the degree of hypoxemia adjusted for oxygen requirements. The Berlin definition of Acute Respiratory Distress Syndrome (ARDS) includes P/F as a diagnostic criterion. P/F is invasive and cost-prohibitive for resource-limited settings. SaO(2)/FiO...

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Autores principales: Patel, Sharad, Singh, Gurkeerat, Zarbiv, Samson, Ghiassi, Kia, Rachoin, Jean-Sebastien
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8592728/
https://www.ncbi.nlm.nih.gov/pubmed/34790417
http://dx.doi.org/10.1155/2021/6672603
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author Patel, Sharad
Singh, Gurkeerat
Zarbiv, Samson
Ghiassi, Kia
Rachoin, Jean-Sebastien
author_facet Patel, Sharad
Singh, Gurkeerat
Zarbiv, Samson
Ghiassi, Kia
Rachoin, Jean-Sebastien
author_sort Patel, Sharad
collection PubMed
description PURPOSE: PaO(2) to FiO(2) ratio (P/F) is used to assess the degree of hypoxemia adjusted for oxygen requirements. The Berlin definition of Acute Respiratory Distress Syndrome (ARDS) includes P/F as a diagnostic criterion. P/F is invasive and cost-prohibitive for resource-limited settings. SaO(2)/FiO(2) (S/F) ratio has the advantages of being easy to calculate, noninvasive, continuous, cost-effective, and reliable, as well as lower infection exposure potential for staff, and avoids iatrogenic anemia. Previous work suggests that the SaO(2)/FiO(2) ratio (S/F) correlates with P/F and can be used as a surrogate in ARDS. Quantitative correlation between S/F and P/F has been verified, but the data for the relative predictive ability for ICU mortality remains in question. We hypothesize that S/F is noninferior to P/F as a predictive feature for ICU mortality. Using a machine-learning approach, we hope to demonstrate the relative mortality predictive capacities of S/F and P/F. METHODS: We extracted data from the eICU Collaborative Research Database. The features age, gender, SaO(2), PaO(2), FIO(2), admission diagnosis, Apache IV, mechanical ventilation (MV), and ICU mortality were extracted. Mortality was the dependent variable for our prediction models. Exploratory data analysis was performed in Python. Missing data was imputed with Sklearn Iterative Imputer. Random assignment of all the encounters, 80% to the training (n = 26690) and 20% to testing (n = 6741), was stratified by positive and negative classes to ensure a balanced distribution. We scaled the data using the Sklearn Standard Scaler. Categorical values were encoded using Target Encoding. We used a gradient boosting decision tree algorithm variant called XGBoost as our model. Model hyperparameters were tuned using the Sklearn RandomizedSearchCV with tenfold cross-validation. We used AUC as our metric for model performance. Feature importance was assessed using SHAP, ELI5 (permutation importance), and a built-in XGBoost feature importance method. We constructed partial dependence plots to illustrate the relationship between mortality probability and S/F values. RESULTS: The XGBoost hyperparameter optimized model had an AUC score of .85 on the test set. The hyperparameters selected to train the final models were as follows: colsample_bytree of 0.8, gamma of 1, max_depth of 3, subsample of 1, min_child_weight of 10, and scale_pos_weight of 3. The SHAP, ELI5, and XGBoost feature importance analysis demonstrates that the S/F ratio ranks as the strongest predictor for mortality amongst the physiologic variables. The partial dependence plots illustrate that mortality rises significantly above S/F values of 200. CONCLUSION: S/F was a stronger predictor of mortality than P/F based upon feature importance evaluation of our data. Our study is hypothesis-generating and a prospective evaluation is warranted. Take-Home Points. S/F ratio is a noninvasive continuous method of measuring hypoxemia as compared to P/F ratio. Our study shows that the S/F ratio is a better predictor of mortality than the more widely used P/F ratio to monitor and manage hypoxemia.
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spelling pubmed-85927282021-11-16 Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis Patel, Sharad Singh, Gurkeerat Zarbiv, Samson Ghiassi, Kia Rachoin, Jean-Sebastien Crit Care Res Pract Research Article PURPOSE: PaO(2) to FiO(2) ratio (P/F) is used to assess the degree of hypoxemia adjusted for oxygen requirements. The Berlin definition of Acute Respiratory Distress Syndrome (ARDS) includes P/F as a diagnostic criterion. P/F is invasive and cost-prohibitive for resource-limited settings. SaO(2)/FiO(2) (S/F) ratio has the advantages of being easy to calculate, noninvasive, continuous, cost-effective, and reliable, as well as lower infection exposure potential for staff, and avoids iatrogenic anemia. Previous work suggests that the SaO(2)/FiO(2) ratio (S/F) correlates with P/F and can be used as a surrogate in ARDS. Quantitative correlation between S/F and P/F has been verified, but the data for the relative predictive ability for ICU mortality remains in question. We hypothesize that S/F is noninferior to P/F as a predictive feature for ICU mortality. Using a machine-learning approach, we hope to demonstrate the relative mortality predictive capacities of S/F and P/F. METHODS: We extracted data from the eICU Collaborative Research Database. The features age, gender, SaO(2), PaO(2), FIO(2), admission diagnosis, Apache IV, mechanical ventilation (MV), and ICU mortality were extracted. Mortality was the dependent variable for our prediction models. Exploratory data analysis was performed in Python. Missing data was imputed with Sklearn Iterative Imputer. Random assignment of all the encounters, 80% to the training (n = 26690) and 20% to testing (n = 6741), was stratified by positive and negative classes to ensure a balanced distribution. We scaled the data using the Sklearn Standard Scaler. Categorical values were encoded using Target Encoding. We used a gradient boosting decision tree algorithm variant called XGBoost as our model. Model hyperparameters were tuned using the Sklearn RandomizedSearchCV with tenfold cross-validation. We used AUC as our metric for model performance. Feature importance was assessed using SHAP, ELI5 (permutation importance), and a built-in XGBoost feature importance method. We constructed partial dependence plots to illustrate the relationship between mortality probability and S/F values. RESULTS: The XGBoost hyperparameter optimized model had an AUC score of .85 on the test set. The hyperparameters selected to train the final models were as follows: colsample_bytree of 0.8, gamma of 1, max_depth of 3, subsample of 1, min_child_weight of 10, and scale_pos_weight of 3. The SHAP, ELI5, and XGBoost feature importance analysis demonstrates that the S/F ratio ranks as the strongest predictor for mortality amongst the physiologic variables. The partial dependence plots illustrate that mortality rises significantly above S/F values of 200. CONCLUSION: S/F was a stronger predictor of mortality than P/F based upon feature importance evaluation of our data. Our study is hypothesis-generating and a prospective evaluation is warranted. Take-Home Points. S/F ratio is a noninvasive continuous method of measuring hypoxemia as compared to P/F ratio. Our study shows that the S/F ratio is a better predictor of mortality than the more widely used P/F ratio to monitor and manage hypoxemia. Hindawi 2021-11-08 /pmc/articles/PMC8592728/ /pubmed/34790417 http://dx.doi.org/10.1155/2021/6672603 Text en Copyright © 2021 Sharad Patel et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Patel, Sharad
Singh, Gurkeerat
Zarbiv, Samson
Ghiassi, Kia
Rachoin, Jean-Sebastien
Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis
title Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis
title_full Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis
title_fullStr Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis
title_full_unstemmed Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis
title_short Mortality Prediction Using SaO(2)/FiO(2) Ratio Based on eICU Database Analysis
title_sort mortality prediction using sao(2)/fio(2) ratio based on eicu database analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8592728/
https://www.ncbi.nlm.nih.gov/pubmed/34790417
http://dx.doi.org/10.1155/2021/6672603
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