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A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice
Operant boxes enable the application of complex behavioural paradigms to support circuit neuroscience and drug discovery research. However, commercial operant box systems are expensive and often not optimised for combining behaviour with neurophysiology. Here we introduce a fully open-source Python-...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8593009/ https://www.ncbi.nlm.nih.gov/pubmed/34782697 http://dx.doi.org/10.1038/s41598-021-01717-1 |
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author | Kapanaiah, Sampath K. T. van der Veen, Bastiaan Strahnen, Daniel Akam, Thomas Kätzel, Dennis |
author_facet | Kapanaiah, Sampath K. T. van der Veen, Bastiaan Strahnen, Daniel Akam, Thomas Kätzel, Dennis |
author_sort | Kapanaiah, Sampath K. T. |
collection | PubMed |
description | Operant boxes enable the application of complex behavioural paradigms to support circuit neuroscience and drug discovery research. However, commercial operant box systems are expensive and often not optimised for combining behaviour with neurophysiology. Here we introduce a fully open-source Python-based operant-box system in a 5-choice design (pyOS-5) that enables assessment of multiple cognitive and affective functions. It is optimized for fast turn-over between animals, and for testing of tethered mice for simultaneous physiological recordings or optogenetic manipulation. For reward delivery, we developed peristaltic and syringe pumps based on a stepper motor and 3D-printed parts. Tasks are specified using a Python-based syntax implemented on custom-designed printed circuit boards that are commercially available at low cost. We developed an open-source graphical user interface (GUI) and task definition scripts to conduct assays assessing operant learning, attention, impulsivity, working memory, or cognitive flexibility, alleviating the need for programming skills of the end user. All behavioural events are recorded with millisecond resolution, and TTL-outputs and -inputs allow straightforward integration with physiological recordings and closed-loop manipulations. This combination of features realizes a cost-effective, nose-poke-based operant box system that allows reliable circuit-neuroscience experiments investigating correlates of cognition and emotion in large cohorts of subjects. |
format | Online Article Text |
id | pubmed-8593009 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-85930092021-11-16 A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice Kapanaiah, Sampath K. T. van der Veen, Bastiaan Strahnen, Daniel Akam, Thomas Kätzel, Dennis Sci Rep Article Operant boxes enable the application of complex behavioural paradigms to support circuit neuroscience and drug discovery research. However, commercial operant box systems are expensive and often not optimised for combining behaviour with neurophysiology. Here we introduce a fully open-source Python-based operant-box system in a 5-choice design (pyOS-5) that enables assessment of multiple cognitive and affective functions. It is optimized for fast turn-over between animals, and for testing of tethered mice for simultaneous physiological recordings or optogenetic manipulation. For reward delivery, we developed peristaltic and syringe pumps based on a stepper motor and 3D-printed parts. Tasks are specified using a Python-based syntax implemented on custom-designed printed circuit boards that are commercially available at low cost. We developed an open-source graphical user interface (GUI) and task definition scripts to conduct assays assessing operant learning, attention, impulsivity, working memory, or cognitive flexibility, alleviating the need for programming skills of the end user. All behavioural events are recorded with millisecond resolution, and TTL-outputs and -inputs allow straightforward integration with physiological recordings and closed-loop manipulations. This combination of features realizes a cost-effective, nose-poke-based operant box system that allows reliable circuit-neuroscience experiments investigating correlates of cognition and emotion in large cohorts of subjects. Nature Publishing Group UK 2021-11-15 /pmc/articles/PMC8593009/ /pubmed/34782697 http://dx.doi.org/10.1038/s41598-021-01717-1 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Kapanaiah, Sampath K. T. van der Veen, Bastiaan Strahnen, Daniel Akam, Thomas Kätzel, Dennis A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice |
title | A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice |
title_full | A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice |
title_fullStr | A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice |
title_full_unstemmed | A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice |
title_short | A low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice |
title_sort | low-cost open-source 5-choice operant box system optimized for electrophysiology and optophysiology in mice |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8593009/ https://www.ncbi.nlm.nih.gov/pubmed/34782697 http://dx.doi.org/10.1038/s41598-021-01717-1 |
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